Trifolium pratense (red clover): 123889955
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Entry
123889955 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123889955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123889955
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123889955
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123889955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
FAIM1
Motif
Other DBs
NCBI-GeneID:
123889955
NCBI-ProteinID:
XP_045795437
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All DBs
Position
LG6:complement(39506969..39510428)
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AA seq
310 aa
AA seq
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MAPGGSIFKEVLESHVMSSDYETGKAKSEAKINSTLTKSTSVGLNGKNGTSSKNGVHDLL
GCPVCKNLMYPPIHQCPNGHTLCSNCKIEVHNICPTCHHDLGNIRCLALEKVAESLELPC
RYQSLGCSDIFPYYAKLKHEQNCGFRPYNCPYAGSECSAIGDISYLVAHLKHDHKVDMHD
GFTFNHRYVKTNPHEVENATWMLTVFNCYGKHFCLHFEAFQLGTAPVFMAFLRFMGDDNE
SKKFSYSLEVGANGRKLIWQGIPRSIRDSHSKVRDSQDGLIIQRNQALYFSGGDKQELKL
RITGRIWKED
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggcagtattttcaaagaagttcttgaatctcacgtgatgtcatcagat
tatgaaactggcaaggctaaatctgaggccaagattaacagtacacttacaaaatctact
agtgttgggttgaatggaaagaatggaactagttcaaagaatggtgtgcatgacttactt
ggctgccctgtctgcaaaaatttgatgtatcccccaattcaccagtgtccaaatggccat
acattatgttcaaattgtaagattgaagttcataatatctgcccaacatgtcaccatgat
cttggaaatataaggtgtttagctcttgagaaagtcgcagaatctttggagcttccttgc
agatatcagagtctaggttgtagtgatatatttccttactatgctaaacttaagcacgag
caaaattgcggatttcgtccttacaattgtccctatgctggatctgagtgctctgcaatt
ggtgatatttcatatcttgttgcccatctcaagcatgaccacaaggttgacatgcatgat
ggatttacattcaatcatcgatatgtcaaaacaaatccacatgaagttgaaaatgctaca
tggatgctaactgttttcaattgttatggaaagcatttttgcttgcactttgaggctttc
cagcttggcacggctccagtttttatggccttcttacggtttatgggcgatgacaacgaa
tcaaaaaaattcagctacagcttagaagtcggtgcaaacgggcgcaaacttatatggcaa
ggaattcctcggagcattcgtgacagtcatagtaaagttagagacagtcaagacggactt
ataattcagagaaatcaagccctttatttttctggtggcgataaacaggagttgaagttg
agaatcactggtcgtatatggaaagaagattga
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