Trifolium pratense (red clover): 123889965
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Entry
123889965 CDS
T08949
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123889965
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tpra04812
]
123889965
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
123889965
Cytoskeleton proteins [BR:
tpra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
123889965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
Vac14_Fab1_bd
HEAT_2
HEAT_EZ
TOR1L1_N
Cnd1
PDS5
HEAT_Maestro
INTS1_R4
Adaptin_N
UTP20
MMS19_N
HEAT_DAAF5
TPR_TTI1_C
MMS19_C
Dopey_N
DUF7217
Motif
Other DBs
NCBI-GeneID:
123889965
NCBI-ProteinID:
XP_045795454
LinkDB
All DBs
Position
LG6:36828039..36844343
Genome browser
AA seq
1443 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLYQILEASRKSLTSSEVTSLVDSCIDLLKDNNFRVSQG
ALQSLASAAVLSGEHFKLHYNALLPAVVDRLGDGKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSSAWAHKSWRVREEFTRTVTSAINLFSATELPLQRAILPPVLQLLNDPNLAVREAAI
LCVEEMYTQAGPQFRDELHRYNLPSSLVKDINARLESIQPKVRSDGIQPGYMTGEINPKP
KRNSPKAKSSSREASLFGAEGDVTEKPIDPVKVYSDKELIREIEKIASILVPEKDWSVRI
AAMQRIEGLVLGGAADYPCFRGLLKQLGGPLSTQLSDRRSSIVKQACHLLCFLSKELLGD
FEAYAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLR
ARCCEYALLVIEHWPDAPEIHRSAELYEDMIKCCVSDAMSEVRSTARMCYRMFAKTWPER
SRRLFSSFDPVIQRLINEEDGGIHRRHASPSIRDRGALMSLPSQASALSNPPGYGTSAIV
AMDRSSSLSSGTSISSGVLLSQTKPLGKGTERSLESVLHASKQKVSAIESMLRGLNMSDK
HNSSTLRSSSLDLEVDPPSSRDPPFPAAVSATNHLTSSSTAEPTAYGVYKGSNRNGSLGL
SDIITQIQASKDSAKSSYHSNVDIEPLPSSSSYSTRRPSERLQERRPVDDNSDIREARRF
MNHTTDKQYLDAPYRDGNFRESHNSHVPNFQRPLVRKNAAGRLSAGRRKSFDDNQLSPGE
MSSYADGPASLHEALSEGLRSGSDWSSRVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLF
FQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKEVVRQPCSTTL
DVVTRTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHSMNAEGAANIGILKLWL
AKLTPLVHDKNTKLKEAAITCIISVYTHFDSTAVLNFILSLSVEDQNSLRRALKQYTPRI
EVDLINYLQNKKERQRSKSSYDPSDVVGTSSEDGIVGFSRKAHYLGRYSVGSLESDGGRK
WSSQDSTILKSSLGPVTSVESEDNNHNHNLETDSNCDNLHSKSKDHAYSVNPMGQDFSSQ
SNQLGHVDSSMDFEGLSTPRLDVNCLVSLERLNVGEGYAHDKELPSVLELNQHTNEAVKI
NSMTDTGPSIPQILHMICNADDGSPVSSKQAALQQLFDASITNDQAVWTKYFNQILTAVL
EVLDDLDSSVRELALSLIVEMLKNQKDALENSVEIVIEKLLHVTKDVVPKVSNEAEHCLT
IVLSLYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMARLPSFLPALFEA
FGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDA
VHD
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcgttggaacttgcacgcgctaaagatacaaaggaaaggatggctggtgta
gaacgtctctaccaaattctagaagcttctagaaagagtcttacatcttctgaagttact
tcgctcgttgattcttgcatcgatctcttgaaggataataatttccgtgtttctcagggc
gcacttcaatctcttgcttccgccgctgttctctccggcgaacactttaagcttcattat
aacgctcttcttcctgccgttgttgaccgtctcggtgacggtaaacagcctgttcgtgac
gccgcacgacggctccttctcacactcatggaggtttcttctcctacaataattgttgaa
agagcaggatcctcagcttgggcacacaaaagctggagagtcagagaggagtttacgcga
actgtaacatctgcaattaatctattttcagctaccgaacttccacttcaacgggctatc
cttcctcctgttttgcagttgctgaatgacccaaatcttgctgttagggaagcggctatt
ttgtgcgttgaggaaatgtatacacaagctggacctcaatttcgtgatgaacttcaccgc
tacaatcttccttcatctttggtgaaagatattaatgccaggttagagagtattcaacca
aaagttcgctcagatggtattcaaccaggttatatgactggggaaattaaccctaaaccc
aagagaaatagtccaaaggccaaaagttcttcaagggaggcctctctttttggagcagaa
ggggatgtcacggagaaacccatagaccctgtcaaggtgtactcagataaggagttaatc
agggaaattgagaagattgcatctatccttgtgcctgaaaaagactggtctgttcgtatt
gctgctatgcagagaattgagggtcttgttctaggaggcgctgctgattatccatgtttt
cgaggactccttaagcaacttggtggacctttaagtacacaattgtcagacagaagatct
agcattgtaaaacaggcttgccatttattgtgctttttgtcaaaggaactcttgggtgat
tttgaagcatatgccgaaatgtttatacccgtccttttcaagctggttgtgattactgtg
cttgtaattgcagagtctgcagataactgcataaaaacgatgctgcgcaactgcaaagtt
gcccgtgtgcttccccgaatagctgactgtgctaaaaatgatcgcaatgcagtacttcgt
gcaaggtgctgtgaatatgctcttttggtcatagaacattggccggatgcaccagaaata
catcgttcagcagagttatatgaggatatgattaagtgttgcgtttcagatgcaatgagt
gaggtacgatctactgcaagaatgtgctacagaatgtttgcaaaaacttggccagagcgt
tcacgtcgcttattttcatcctttgaccctgttattcaacggttaataaatgaagaggat
ggaggaatacacaggcgacatgcttcaccttccattcgtgatagaggtgcactgatgtca
ctacccagtcaagcctctgctttgtctaatccacctggttatggaacatctgcaattgtt
gcaatggatagaagttcaagtttatcatcagggacatctatctcctctggtgtacttctt
tcacagacgaagccacttggtaagggtacagaacgtagtttggaaagtgtgttgcatgca
agcaaacagaaggtctctgctattgaaagcatgcttaggggcttgaatatgtctgataag
cacaattcatctactctccggtcatcaagtttggatctagaagttgaccctccatcgtct
cgtgatccgcctttcccagctgctgtctctgcaaccaatcatttgacaagctcttcaaca
gcagaacctactgcttatggtgtctataaaggtagcaaccgaaatggtagtctgggtttg
tccgacataatcactcaaattcaagcttccaaagattctgcaaagtcatcatatcatagt
aatgttgatattgagcctttaccatcatcttcctcatattcaactagaaggccttctgaa
agattacaagaaagacgtcctgttgatgacaatagtgacattagggaggctaggcgattt
atgaaccacaccactgataagcagtatttggatgccccatatagagatggaaactttagg
gaatcacataatagccatgtgcctaattttcagagaccgctagtgagaaagaatgcagct
ggacgtctgtctgctggcaggaggaagagttttgatgataaccagctatctcctggagag
atgtcaagttatgcagatggaccagcatctcttcatgaagctttgagtgaaggacttagg
tcaggttctgactggtcttctagggttgctgcatttaattatcttcactcgttgttgcag
caaggtccaaagggaactctagaagttgttcagaattttgagaaggtaatgaagttgttt
ttccagcacttggatgatcctcaccataaagttgcacaagctgctctttcaacactagca
gatattgttccagcatgtcgaaagccttttgagggttacatggaaagaatattaccacat
gtcttttctcggttaattgatcctaaagaggttgttaggcagccatgttcaacaacattg
gacgttgttaccagaacttacagtattgattctctcttacctgcactgttacgttctcta
gacgaacaaaggtctccaaaggctaaattggccgtgattgaattcgcaatcaattccttt
aacaaacattcaatgaatgcagaaggtgctgctaatattggcatactaaaattgtggctc
gctaagttaacccctttggttcatgataaaaatacaaagcttaaagaagcagctattact
tgcattatatcagtgtatactcactttgattcaactgcagttcttaatttcattctgagt
ttgtcggtggaagatcaaaattctttgagacgagcccttaaacagtacacccctcgcatc
gaagtagacctaataaactatctgcagaacaagaaagagcgacaacgttccaagtcttcc
tatgatccatctgatgttgtaggaacatcatctgaagacgggattgttggtttctctagg
aaagctcattaccttggaagatattcggttggttccctagaaagtgatggtggcagaaag
tggagctcccaggattcaactattttgaaatccagtcttggtcccgtaacttctgttgaa
agtgaggacaataatcataaccataatcttgagactgattctaattgtgataatcttcat
tcaaaatccaaagatcatgcatattcagtcaatccaatgggtcaagatttcagctctcaa
tctaatcaacttggacatgtggacagtagcatggattttgagggcctttcaactcctcgt
ctagatgttaattgtctggtgtcattagagcgtttaaatgttggtgaaggctatgcacat
gacaaagaacttccttctgtattggagcttaatcaacacacaaatgaagctgtaaagatt
aactccatgacagacactgggcccagtattcctcaaattcttcatatgatatgcaatgcc
gatgatggaagccctgtttctagtaaacaggctgcacttcaacagttatttgacgcttct
attacaaatgatcaggctgtatggactaagtacttcaatcaaattttgaccgctgtgctt
gaggtgctggatgatttggattcctcagtcagagagcttgctctttcattgatagttgaa
atgctcaaaaaccagaaagatgctctggagaattcagttgagattgtaattgagaagctg
cttcatgttacaaaagatgtcgttcctaaggtttcaaatgaagcagagcattgcctgacc
attgttttatctctttatgatccattcagatgtttaagtgttattgtccctctactggtt
accgaggatgagaaaactcttgtcacttgcattaattgcttaacaaagcttgtgggcagg
ctctctcaggaggaactgatggctcggttaccctcgtttctgcctgctctttttgaagct
tttggaaaccagagtgcagatgttcgcaagactgtcgttttctgtctcgtggatatttat
ataatgcttgggaaagcattcttgccatatttgcaaggccttaacagcacacagttgaag
ctggtcactatttatgctaatcgaatctcacaagccaggacaggcaaagcaattgatgcc
gttcatgattag
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integrated database retrieval system
