Trifolium pratense (red clover): 123890075
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Entry
123890075 CDS
T08949
Name
(RefSeq) YTH domain-containing protein ECT4-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123890075
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123890075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
DUF3942
Motif
Other DBs
NCBI-GeneID:
123890075
NCBI-ProteinID:
XP_045795567
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All DBs
Position
LG6:complement(11556761..11562719)
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AA seq
669 aa
AA seq
DB search
MAAVAPSPDKAASLLQSLTLDSQPKTIVGDVEPVKKNGAAFSNGTAKGAGKPFNPNPSFV
PNNGYPSTTYYYGGYDGQGDWSAYPNYLNLDGGMAQSVYGDNCSYMYHQGYGYPPYGAYA
SPNSSSPIVQPDGQMYGLQQYQYPCSYYNSPTSADGSFSSYKTSVPQREMSTAVNADRIP
PNVMNKGNSVSLVNGDCTNQNGLKAFISSSQHTSLNTRDSYQGSSLPACAPLSGHQGPKL
STHGTQSAIATDVSLVSDRQFKHGGKVGLSSQAAHVKDFSSQRNQRHSQPLPQFMNLNGS
RHPSGMELVPGFMNGIYPSNSMFSQYGNTFRANSRYGSSVYGSRTGSFDSKYRSTGNGYF
ANDSRKNVDGFSELNKGPRGAKSYDNKSAKSLGAVTLLLKGQNLTVKSDDKEVVPLVVPS
KEHYNGEDLSEHYSDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDVAYQEAKEKPG
GCPIFLLFSVNTSGQFVGLAEMTGPVDFDKSVEYWQQDRWTGCFNVKWHVIKDIPNGVLR
HITLENNENKPVTNSRDTQEVKFDKGIQIVKIFKEHSSKTSILDDFGFYESREKTTQERK
YKEQQLPKQVNKTSDITFGSVTSPKSLGTAQAKLNESAIAEAARGKLNSEVLLERNGSTP
AFEDSSKSS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgttgctccttctcctgacaaagctgcaagtttactgcagagtttgaccctg
gattcacaacccaagactattgttggagatgttgagcctgtcaagaagaatggagctgct
ttttccaatggtacagctaagggggcgggcaagccattcaatccaaatccaagttttgtt
cctaacaatggatatccttcgactacatattattatggaggttatgacgggcaaggagat
tggagtgcctatcccaattatttgaaccttgatggagggatggctcaaagtgtttatggg
gataattgctcttatatgtatcatcaaggttatggctacccaccatatggagcatatgct
tcgccgaattcctcctcaccaatagttcaacctgatggtcagatgtatgggcttcaacag
taccagtatccttgttcttattacaactctccaacttctgctgatggatcattttcttct
tacaaaaccagtgttccacaacgagaaatgtcaactgctgttaatgcggatcgcattcct
ccaaatgttatgaataaaggaaactctgttagcctggtcaatggtgactgtacaaaccaa
aatgggttaaaggcttttatatcaagttcccagcacacatctttgaatacaagggattct
tatcaagggtctagcttgccagcttgtgctccattgtcaggacatcagggtccaaagttg
agtactcacggtacacagtcagcaattgctacagacgtgtcattggtttctgatagacag
ttcaaacatggaggaaaggttggattatcttcacaagcggctcatgtcaaagatttctca
tctcaaaggaatcaacgacactctcagccacttccacaattcatgaacttgaatggttcc
aggcatccatctggaatggaactagttcctggattcatgaacgggatttatccaagcaac
agtatgttcagccaatatggaaacacattcagagcaaattctcgttatgggtcttctgta
tatggatctagaacaggttcttttgatagcaagtatagatccacaggtaatggctatttt
gctaatgattccagaaaaaatgtggacggtttcagtgagctaaacaagggaccaagaggt
gccaagagttacgataataaaagcgccaaaagtcttggagctgtcacattattactcaaa
ggacagaaccttacagtgaagagtgatgacaaagaagtagtgcctcttgttgttccaagt
aaagaacattacaatggagaagatttgtctgagcattattctgatgctaagttttttatc
atcaaatcctatagcgaggacgatgttcataagagcataaaatacaatgtttgggcaagt
actcccaacggcaacaaaaagctggatgtggcataccaggaagccaaggagaagcctggt
ggctgtcctatatttttgttattttcggtcaacactagcggtcaatttgttggtttagcc
gagatgactggtccggttgattttgataaatctgtagagtattggcagcaggacaggtgg
actggttgctttaatgtgaagtggcatgtcattaaggatattccaaatggcgtgttaagg
cacataacactagaaaacaacgaaaacaaacctgtaactaatagcagggatactcaggag
gttaagttcgataagggtattcaaattgtcaaaattttcaaggagcattcaagcaaaaca
agcatattggatgattttggcttttacgagtcccgtgaaaagaccactcaagagagaaaa
tataaagagcagcagttaccaaaacaggtgaacaagaccagtgatataacatttggctca
gttacatcacccaagtctcttggtacagcacaagcaaagttgaatgaatcagctattgca
gaagcagcacgaggaaagttgaattcagaggtgctgttagaaaggaatggatccacacca
gcatttgaagattcttctaagagcagttag
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