Trifolium pratense (red clover): 123890169
Help
Entry
123890169 CDS
T08949
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123890169
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpra04040
]
123890169
Ion channels [BR:
tpra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123890169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
123890169
NCBI-ProteinID:
XP_045795672
LinkDB
All DBs
Position
LG6:complement(28884758..28889577)
Genome browser
AA seq
680 aa
AA seq
DB search
MYRLISTPASTFAQFRRLRSRPKITAASLEEKYASRILLWRYQILDPDSEFVAYWNKVFL
VTSLLALFIDPLYFFLPTVGGPACLTADPKISILLTVLRSFADLFYLLHMVMKFRTAFVA
PNSRIVGRGELVMDSWEIALRYLKSDFLIDLAATVPLPQIVVWLVIPASRGTKSDHANNT
LALLVLIQYVPRLFLIFPLNQRIQKTTGVIAKTPWIGAAYNLVLYMLASHVTGATWYLSS
IGRQYNCWKTQCDNENRSHTLSCLPSFLDCNSLELPERQYWLNITRVVTKCDAKSKINIK
YKFGMFADAFLNDVVTTSFKERYFYCLWWGLRNLSSYGQNLDTTTYLLETLFCIVLCIAG
LVLFSLLIGNMQTYLQSMTVRLDEWRIRKRDTEEWMRHRQLPPDLQERIRRFVQYKWLAT
RGVDEESILLSLPLDLRREIQHHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTY
IFQEDDPVDEMLFIIRGTLESSTTNGGRYGFFNSITLRPGDFCGEELLTWALLPNSTLNL
PSSTRTVRALTEVEAFALQAEDLKFVASQFKRLHSKKLQHAFRYYSQQWRTWSSCFIQAA
WRKHQKRKAARELAIKEGIYFMEDPEIEESSGNGKKVKNLGATVLASRFAANTKKGKIQD
SDPVPQLFKPDEPDFSHGGV
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtatagattaatatccacgccggcatcaacattcgcccaattccggcgactccgctcc
agacctaaaatcaccgccgcaagtctcgaagagaaatacgcttcacgtatcttactatgg
cggtaccagatcctggacccagacagcgaattcgtcgcgtattggaacaaagtctttctt
gtcacaagtctcctcgcattgttcatagaccctctttacttcttcctcccaaccgttgga
ggacccgcttgtttaacggcagaccccaaaatcagcatcttactcaccgttcttcgatca
tttgcggatcttttttatcttcttcatatggttatgaagtttcgtactgcatttgttgct
cctaattccagaattgtcggtcgcggtgagcttgttatggattcttgggaaattgctttg
cggtatttgaagtctgattttcttattgatcttgctgctaccgttccattgcctcagatc
gttgtctggttagtgattccagcgagtagaggcacaaaaagtgatcatgccaacaacact
cttgcacttcttgttcttattcagtatgttcctaggctctttctcatctttcctttgaac
cagcgtattcaaaaaacaactggtgttatagccaagactccctggatcggtgctgcatac
aatcttgttctctacatgctagctagccatgttacaggagcaacttggtatctatcatca
attggaagacaatacaattgctggaaaacacaatgcgataatgaaaatcgatcgcatacc
ctttcttgcttgccaagttttcttgattgtaatagtttggaactccctgagagacaatac
tggctaaatatcacacgagttgttacgaagtgtgatgcaaagagtaagattaacatcaaa
tacaagtttggaatgtttgcagatgctttcctcaatgatgttgtcactactagttttaag
gaaagatacttctattgtctttggtggggtttaagaaatttaagttcttatgggcaaaat
ctggacaccaccacataccttttagagacacttttctgcattgtcttatgcattgctgga
ttagttcttttttcacttttgattggaaatatgcagacatacttgcaatcgatgacagtt
agactagacgaatggaggattcggaaaagagatacagaggagtggatgaggcatcgacag
ttacctccagatttgcaagagcgtatccgtcgcttcgttcaatataaatggctagctaca
agaggagtagatgaagagtccatactgctttccttacctttggatctacgccgcgaaatt
caacatcacttgtgtctctctctagtgcgacgtgtgccatttttctcacaaatggatgat
caactacttgatgcaatatgtgaacgtcttgtatcatcattgagtacacaaggcacatat
atatttcaagaagatgatccagtagatgaaatgctgtttatcattagaggtacattagag
agttctacaaccaatggaggaaggtatggattcttcaattcaatcacactaaggccagga
gacttttgtggagaagaattgttaacatgggctttattaccaaactcaaccctcaattta
ccttcctctactcgtaccgtaagagctcttacagaagtagaagcttttgcgctacaagca
gaggatctaaaattcgtggcgagtcagttcaagaggcttcacagcaagaaacttcagcat
gcttttaggtattattcacagcaatggagaacatggagttcttgtttcatacaagcagca
tggagaaagcatcagaaaaggaaggccgcgagggaattggcaattaaagagggaatttac
ttcatggaggatcctgagattgaggaatcatcaggcaatggtaaaaaagttaaaaatctt
ggtgctactgttttggcttcaagatttgctgcaaatacaaagaaagggaagattcaagat
agtgatcctgtgccgcagttgtttaaacctgatgaacctgatttctctcatggtggtgtt
tag
DBGET
integrated database retrieval system
