Trifolium pratense (red clover): 123890291
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Entry
123890291 CDS
T08949
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123890291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123890291
03036 Chromosome and associated proteins [BR:
tpra03036
]
123890291
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
123890291
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
123890291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
eIF2A
Ge1_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
RMC1_N
Beta-prop_SPT8
CFAP43_N
WDR54
Beta-prop_VPS8
YajC
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
123890291
NCBI-ProteinID:
XP_045795826
LinkDB
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Position
LG6:5229431..5232657
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AA seq
454 aa
AA seq
DB search
MDSGSWISSTKSRSPFPERFLQRKNSNKDNLDRFIPNRSAMNFDYAHYMLTEGAKAKEKE
NSALMSPSRSAYQKLLAEAANMNRTRILAFKNKPPTPVELFPRGILSPPPQSKTSKPKRC
IPQTSERTLDAPDILDDFYLNLLDWGSGNVLSIALENTVYLWNASDSSTSELVTVDDEHG
PVTSVSWAPDGRHLAVGLNNSLVQLWDTTANKQLRILKGGHRARVGSLAWNNHILTTGGM
DGKIVNNDVRVRSHIIETYRGHNQEVCGLNWSLSGRQLASGGNDNVVHIWDRSAVSSNSR
TRWLHRFEEHTAAVKALAWCPFQANLLASGGGGGDHCIKLWNTHTGARLNSVDTGSQVCA
LLWNKNERELLSSHGFTENQLTLWKYPSMVKMAELNGHTSRVLYMTQSPDGCTVASAAAD
ETLRFWNVFGTPAPPCKAAPKTYNEPFADFNRIR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggattcgggatcttggatttcttctaccaaatcccgatcccctttcccagaacgcttc
ctccaaagaaagaattctaataaggataacttggataggtttatccctaatagatctgcg
atgaatttcgattatgctcattacatgttgacggagggtgcaaaggcaaaagaaaaagaa
aattcagcgttgatgtcaccgtctcgttcagcctaccagaaactactcgctgaagccgct
aacatgaaccgaaccagaatcttggccttcaagaataagcctccgacaccggtcgaactc
tttcctagaggaattctttcacctcctcctcaatccaaaacctccaaacccaaacgatgc
attcctcagacttctgagaggacattggatgcccctgatatattagatgacttctacttg
aatttattagattggggtagcggtaatgtccttagtatcgcccttgaaaataccgtttat
ctctggaatgcttctgatagttccacttcggaacttgtcactgtggatgatgaacatggt
cctgttacaagtgttagctgggcccctgatggtcgccatttagcagttgggttaaacaat
tcccttgtccagctttgggatacaactgctaataaacagctaaggatattgaagggtgga
cacagagcaagagtgggttcactggcttggaacaatcatattctgacaacaggaggaatg
gatggtaaaatagtaaacaatgatgttagagtgagatctcacatcattgaaacttacaga
ggacacaaccaggaggtctgtgggctcaattggtcactgtcaggacgacaattggcgagt
ggtggaaacgataatgttgttcacatatgggataggtctgcggtttcttcaaattcacgt
acccgttggcttcacaggtttgaagaacacacagctgcagtgaaggcactggcttggtgt
ccttttcaggctaatctattggcttctggtggaggtggaggtgatcattgcattaagctg
tggaacacacacacgggtgcgagattgaattctgttgacacaggatctcaagtatgtgct
ctgctatggaacaagaacgagcgtgagcttcttagctcacatggtttcactgagaaccag
cttaccctttggaagtatccttcaatggtgaagatggcggagctcaacggtcatacctca
agggtgctgtatatgacgcagagtccagatgggtgtactgttgcatctgcagccgcggat
gagacacttagattttggaatgtctttggaaccccagcaccaccatgcaaagcagcacca
aagacatataatgagccttttgctgatttcaatcgtatccgttga
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