Trifolium pratense (red clover): 123890301
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Entry
123890301 CDS
T08949
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC123890301
KO
K14841
ribosome biogenesis protein NSA1
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123890301
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123890301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_DCAF12
Beta-prop_WDR36-Utp21_2nd
DUF5564
DUF8109
PQQ_2
Motif
Other DBs
NCBI-GeneID:
123890301
NCBI-ProteinID:
XP_045795838
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Position
LG6:complement(5287312..5295775)
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AA seq
585 aa
AA seq
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MPRTSTLECPGCPPLRALTFDTLGLIKVVESREKQGGPKVVERWGDPDASKSVNAVSIID
RKSNPLVAVARKNGQIEILSPVTGISQATISNANDLDVQSEENSIIGLHLFAKQNLELDS
RDYNLLTCTSKGNASIRSIEVPESATGSSSTNSSKTWNVCNSGNILCCKVDGNEKFALFG
GKGVEVNIWDLDNCTKIWNAKSPAKNSLGIFTPTWFTSVSYLSKDDHRKFVAGTNNHQVR
LYDISAQRRPVLSIDFRETPIKALAEDIDGNTIYLGNGSGDMASVDIRTGKMLGSFTGKC
SGSIRSIVRHPDLPVVASCGLDGYLRLWDTNSRQLLSSVFLKQHILHVLFDSNFIVEDTP
KGADSLPSKEETIEEISDEEETIEEISDEEEIEAIPLKRKKSSRNKENVIDGSEKRKELR
RVTNAKKPKEMMEIRRPHQKTKEASXHPRKKRRAXNMKFQMKGCDLDGFYAMRYIQRCIK
TNFGVRGDEGDTSSSRNLRLAVGSAWRLLCGQVTRLVRLVQLWNFYVCDKFILNYSTRKL
GFRHVSWFLAKCLVFCFAAVGLWTIFYLRSENDFQSLFIIPSILF
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaccagcactcttgaatgccctggttgccctccgcttcgtgctttaaccttt
gacacacttggtcttatcaaagttgttgaatcccgtgaaaaacaaggaggtcctaaagta
gtagagagatggggtgaccctgatgcatcaaagtctgttaatgctgtttcaatcattgat
cgaaaatctaacccattagtagctgtagcaaggaaaaatggtcagattgagattttgagc
cctgtcactggaatttctcaagctacaatttcaaacgccaacgatttagatgttcagtct
gaagagaatagtattattggcttgcatctatttgcaaaacaaaatcttgagttagattcg
agggattataatttacttacatgcacgagcaaagggaatgcgagcataaggtccattgaa
gttcctgagtcagcgacaggatcttccagtaccaattcttcaaaaacctggaatgtatgt
aatagtggtaacattttgtgttgcaaggtagacggaaatgagaagtttgctttatttgga
gggaaaggcgttgaagtcaatatttgggatcttgacaactgcacaaagatctggaatgcc
aaatctcctgctaaaaacagccttggtatatttacacctacctggttcacatctgtttca
tatctaagtaaagatgaccatagaaaatttgttgctggcaccaataaccatcaggttcgc
ctatatgacatatctgctcagaggaggcccgttctctctattgattttcgtgagacacca
attaaagcattggctgaggatatagatggcaacacaatctatttagggaatgggtctggt
gacatggcttctgttgatatacgtacaggaaaaatgctaggatcttttaccggaaaatgc
tctggaagcatcagatcaattgtcaggcatcccgatctacctgtggtagcttcatgtgga
ctggatggctatttacgactttgggatacaaattcaaggcagcttctttcttctgttttc
cttaagcagcatattctgcatgttctttttgactccaatttcattgttgaagatacgcct
aaaggagcggattctctaccaagcaaggaagaaactatagaagagatctcagatgaggaa
gaaactatagaagagatctcagatgaggaagaaattgaagcaatacctttgaaaagaaaa
aagtcttctagaaataaagaaaacgtgatagatggtagtgaaaaaagaaaagagttaagg
agagtgacaaacgcaaaaaaaccaaaggaaatgatggaaataagaagaccacatcaaaag
acaaaggaagcaagttagcatccaagaaaaaaaagaagagctnncaatatgaaattccag
atgaagggttgtgatttagatggattttatgctatgcgatatatacaacgatgtatcaaa
actaattttggggtgcgaggtgatgaaggtgatacaagttctagcaggaatttgcgtttg
gcagttggatcagcttggaggttactttgtggacaagttactaggctggttagattagtt
caattgtggaatttttatgtatgtgacaagtttatcttaaattattcaacaaggaagtta
gggtttaggcatgtctcatggttccttgcaaaatgtttagtattttgctttgcagctgtt
ggcttgtggacaatcttttatcttaggagtgaaaatgattttcaatccctcttcattata
ccatcaattttgttttaa
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