Trifolium pratense (red clover): 123890321
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Entry
123890321 CDS
T08949
Name
(RefSeq) uncharacterized protein LOC123890321
KO
K14827
pre-rRNA-processing protein IPI1
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123890321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123890321
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
123890321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
TOR1L1_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
123890321
NCBI-ProteinID:
XP_045795864
LinkDB
All DBs
Position
LG6:5522472..5535972
Genome browser
AA seq
873 aa
AA seq
DB search
MTHPKAKTKSKKKTGVVDFKKRKVKIGRKLPPPKNSTNTEVKSKAIILPEQSVAADKAGL
AVNKKGLTLKELLQQTSHHNAKVRRDALMGIKDLFSKHPEELTLHKYRVVEKLRERIGDE
DKVVRKSLHDLFKLAIFPGCKQDNQELITSLMMAYIFNAMTHLAVDIRITAFDFLDLTLE
FYPPSFSSYAEKIFQNYEDILRKNQYHLQDKEKLKDALAGLVRCLSLLPWNIEETDLQNK
DDIGQRVLHAFEADTSMSSTGFSHIIMKLKDIVLVLVNSFQEFIALFNARDNLEGKSFGC
MSSILQSIDLIVRSFVYGLDNKLECTSSQGGANVPVWDVSVSSAFLKKLFPLFPFHQDGL
PQKDYDRLLDLNMVMAKIFFELNEWICLPPFLLEKFLEFLENALLGKFGTAAKSGKAVWE
KHLVQLLPFIPKFISRGASDWTSRLLWAFTQTFKGSKPGSLLKLACLSAIEDMLTPIQSM
LSPETNNPGNVDLQEALCAWIEELPMLLIQLGDKHPASSLASVRLQLRIGQRALLNSALV
CVYDSMQNSLQDFYSTCQGENICYGPFVRLPRESQELSLCCLYYFSHLDLPFLKSIAGCC
LSPDLDPYVLFRTIEILQSAYKDGHINIADYLSVFITLVLRFKVSSVAGLEGEARCKTLK
SMTTVFCSYMEQIGNSSLVLQIIEKVVVDQIMLKPSLDNSCSLLRMLVTVDSKPTRLSDQ
SIITLGPCLSEYLMDAVQRIPEDGEEQSITSNHLSPIYYLLPCFFLFDRCHQLMGYVLKT
MGSAITESSFSLENDNGTQHTRNCLTRVNTVASVLVLMHKDAKLQQIMSEFKEDIDNIIQ
KVISLQTSKQISPTIEERHKIKCAFERLNVLTR
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgactcatcccaaagcaaaaaccaaatcaaagaaaaagactggcgttgtcgactttaag
aaaagaaaggtcaagattgggaggaaactaccaccgcctaagaattcaacaaataccgaa
gttaaatctaaagcaattattctgccggagcagagtgtagcggcagataaggcaggttta
gctgtaaacaagaaaggtttgactttaaaagaacttcttcagcaaacatctcatcacaat
gcaaaagttcgaagagatgcactgatgggtattaaggatctattcagcaaacatccagaa
gaactgacgttgcacaagtatcgtgttgtggaaaaacttcgtgaacgcattggtgatgag
gataaagtggttcggaaatcattacatgatctttttaaactagcgatttttcctggttgt
aaacaggataatcaagagctgatcacttctttaatgatggcttacatatttaatgcaatg
acacatttggcagttgatattcggatcacggcatttgatttcttagacctgactcttgag
ttttatcctccttcattttcttcttatgcagaaaagatttttcagaattatgaggatatc
ctaaggaagaaccagtaccatttacaggacaaagaaaagctaaaggatgctttggccgga
ttagttcgctgcctgtcactcttgccatggaatatagaagaaactgatttgcaaaataag
gatgatattggacaaagggtattgcatgcttttgaagctgatacctctatgagctctact
ggtttttctcatatcataatgaaactgaaggatatagtgctagtattagtaaatagtttt
caggaatttattgcattgtttaatgctagagataatctcgaagggaagtcctttggttgt
atgtcatccatccttcaaagcatagatcttatagtcaggtcctttgtttatgggcttgat
aataagttggaatgcacaagttctcaaggtggagccaatgtgcctgtatgggatgtatca
gtctcttctgcattcttgaagaaattatttcctctttttccctttcatcaagatggtctt
ccacaaaaggattatgataggttgcttgacttgaacatggtcatggcaaaaatatttttt
gaattaaatgaatggatctgccttcctccttttttgttggaaaaatttctagaatttctt
gagaatgcactgcttgggaagttcggcacagctgcaaagtctggtaaggctgtctgggaa
aaacatctagttcagctccttccttttattccaaaatttatttcacgtggagcaagcgat
tggacgtctcggcttctttgggcatttacccagacattcaagggaagtaagccaggctcc
ttattgaaattggcctgtctctctgcaattgaagatatgctaactcctattcagagcatg
ctttccccggagacaaacaatccaggaaatgtagaccttcaagaagctttatgtgcatgg
atcgaagagcttcctatgttgcttatccagcttggtgataaacacccagcctcctccttg
gcttcagtaaggcttcaacttcgtattggacagcgtgctttgttgaactcagcacttgtt
tgcgtgtatgacagcatgcaaaactcattgcaagatttttattctacttgtcaaggagaa
aatatatgctatggtccttttgtcagacttcctagagaatctcaagagctttctttatgt
tgcctttactatttctctcatttagacctaccttttctaaagtcaatagctggctgttgc
ctaagtcctgatctagatccctatgtgttatttcgcaccatagagattcttcagtcagcc
tataaagatggacatataaatattgcagattacctgagtgtcttcatcaccttagtcttg
cgtttcaaagtttcttctgttgctggtttggagggtgaggcacgatgtaaaactttgaag
tcaatgacaacggttttttgctcatacatggaacagattggcaacagttctcttgttcta
cagattatagagaaagtggtagttgatcaaataatgctaaagccttctttggacaatagt
tgttctctcctaagaatgcttgttacggttgattctaagcccacaagactttctgaccaa
agcattatcactctaggcccttgtctttctgaatatctaatggatgctgtgcagcgcatt
ccagaagatggtgaggagcagagcattacctccaatcatttaagtcccatttattatctc
ctaccttgttttttcttgtttgatcggtgccatcaacttatgggttatgtattgaagaca
atgggatcagctataactgaaagtagtttctcacttgaaaatgataatggcactcaacat
acgaggaactgcttgactagggtaaacactgttgcatctgtacttgtgttgatgcacaag
gatgcaaaattgcaacaaattatgtccgaattcaaggaagatattgataacatcatacaa
aaagttatttccttacagacttcaaagcaaattagtccgacaattgaagaaaggcataaa
ataaaatgtgcatttgagcgactgaatgttttaacacgataa
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