Trifolium pratense (red clover): 123890355
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Entry
123890355 CDS
T08949
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123890355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123890355
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123890355
mRNA degradation factors
5'-3' decay
Decapping complex
123890355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
123890355
NCBI-ProteinID:
XP_045795906
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All DBs
Position
LG6:complement(5852217..5856944)
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AA seq
348 aa
AA seq
DB search
MSQSKKLTPNLDQHSTKLLNLTVLQRMDPFIDEILFTAAHVSFYDFNIETNQWSRKDVEG
SLFVVKRNAQPRFQFIVMNRKNTDNLVENLLDFEYELKKPYLLYRNASQEVNGIWFYNPE
ECEEVANLFNRILNAYPKTLPNTTMPSDKSEFEELGQVSTIRESPIESSSAAAAATEAPE
DSIFTNFFNTCKVTGPYASNVESFHQPYQSASVTSTVPGGFMSPMPSIQMPSASIETTNS
AYPVSNLVKPSTFLTPNSLLPLIPPISSPVQPSMAVRHSQNLPRQYGTPLLQPFPPPNPP
SSLTPISSSMPNRPVISRDKVRDALVSLVQDDKFIDMMFQTLFKMHNS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtctaagaaattgacgccgaatctggatcagcacagtacaaagttactcaat
cttactgtgctccaacgcatggatccattcatcgatgagattctcttcaccgctgcgcat
gtttcgttctacgacttcaacatcgaaacgaatcagtggagtcgtaaagatgttgaagga
tctctctttgttgttaagaggaatgctcaaccgcggtttcaatttattgtaatgaatcga
aagaatacagataatctagtggaaaatctattggattttgagtatgaacttaaaaagccg
tacttgttatatcggaatgcatcccaagaagttaatggtatatggttttacaatccagaa
gaatgtgaagaagttgcaaatctctttaataggattcttaatgcatacccaaagacactt
ccaaatacaacaatgccttctgacaaaagtgagtttgaggaacttggccaagtgtcaaca
ataagggaaagccctatagagtcatcttcagctgctgctgctgcaactgaagctcctgaa
gattctattttcacaaatttcttcaacacatgtaaggttactggaccttatgcttcaaat
gtggaaagttttcaccagccctaccagtctgcaagtgtcacttctactgttcctggtggt
tttatgtctcctatgccttctattcaaatgccatctgcctctattgaaacaaccaacagt
gcctatccggtttccaatcttgttaagccttctacttttcttacgcccaactctttatta
ccattaattccacctatttcttcacctgtgcaacctagtatggctgttcgtcattcacaa
aatctgccacgccaatatggcactccactgcttcaacccttcccacctcctaatcctcct
tcttctcttacccctatttctagctccatgccaaatagaccggttatcagcagggataaa
gtccgtgatgcacttgtatcattggttcaggatgataagttcattgacatgatgttccaa
acattgtttaagatgcataattcatga
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