Trifolium pratense (red clover): 123890411
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Entry
123890411 CDS
T08949
Name
(RefSeq) ABC transporter G family member 39-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123890411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123890411
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
123890411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_16
AAA_22
AAA
AAA_18
AAA_29
AAA_33
AAA_30
NACHT
NTPase_1
Rad17
AAA_28
RsgA_GTPase
ABC2_membrane_3
AAA_17
cobW
AAA_5
nSTAND3
RNA_helicase
RuvB_N
NPHP3_N
AAA_19
Viral_helicase1
Ploopntkinase3
ATP_bind_1
AAA_24
T2SSE
AAA_11
Motif
Other DBs
NCBI-GeneID:
123890411
NCBI-ProteinID:
XP_045795977
LinkDB
All DBs
Position
LG6:6323832..6329763
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AA seq
1253 aa
AA seq
DB search
MTLLLGPPGSGKTTLLKTLAESLDRNLRIRGRITYCGHELNEFVARRTCAYIGEHDLHYG
EMTVRETLDFSGRCLGVGTRYQMLEELLRREIGAGIKPDPEIDAFMKATSLSGQKASLIT
DYVLKLLGLDICADTKIGDDMTRGISGGQKKRVTTGEMLAGPAKTLFMDEISTGLDSSTT
FQITKFMRQMVHILDVTMVISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLEFFETI
GFKCPSRKGVADFLQEVTSKKDQQQYWFRNDKPYRYVSVSEFVDCFNSFHIGEKLVEELK
VPYDKRKTHPAALVKEKFGISNWELLKACLSREWLLMKRGNAVFVFRNIQLAMMAIFLAT
LFPRTIMPFGSVEDGQKYFGALFFTMSTMMFHGGAEQSLLVDRLPVFYKQRDFMFFPAWA
FGLPMWLLRIPFSFIEPIIWILPTYYTIGFAPSASRLFRHYLVCVSINNMSLGLFRLVGA
IGRTQVLSNILAGLTYQLVFVLGGFIVAKNDIKPWMLWGYYVSPMSYGQNAIVINEFLDE
RWSKPITDPIDNATTVGKLLLKARGFYTQDYWYWICIGALFGFSLLFNSLFILAITYLNP
IDGSNAFVEDEGDAKNENLTLIQNTNKGSAESSSLNEERRKGMVLPFQPLSLAFNHLNYC
VDMPVEMKSKGINEDRLQLLHDVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIE
GSINISGYPKNQTTFARVSGYCEQNDIHSPYVTVYESLLFSAWLRLPSDIDTKTRKRFVE
QVMELVELTPIKDALVGFPRVNGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAA
IVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQIIYAGPLGHQSHKLIEYF
EAIEGVPKINVGYNPAAWMLEISSASTEAQLGVDFAEIYANSTLYRRNQELIEEISTPTP
GSTDLFFPTKYSQPFFVQFKACFWKQYWSYWRNPPYNCARFIFTISIGLLFGLIFWDKGQ
HFQKQQDLFNLMGAMFAVVMILGTINIMGVQPVVDMERIVLYREKAARMYSELAYAFGQV
AIEIIYNLIQAAIYTTLIYSMIGFEWNAARFFLLYYFLSMCLIFLTLYGMMSVALTPSYQ
LASIFSPVFTSIWNLFSGFVIPRTQIPKWWRWFYWASPNAWAIYGIVTSQLGDKNDQIEV
PGVGYMSVKEFLKQTYGFEYDFLPWVAIAHVGWVLLFLFFFAYAMKFLNFQKR
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaccctacttttgggtcctccaggttcagggaaaactacattgcttaagacacttgca
gagtctcttgatcggaatttaaggattagaggaagaattacttattgtggacatgaacta
aatgaatttgttgctagaagaacatgtgcttatattggtgaacatgaccttcattatgga
gaaatgactgtgagagagacattagatttttcaggacgttgtttaggtgttggaacaagg
tatcaaatgttagaggaacttttaagaagggaaataggagcaggaattaagccagaccct
gagattgatgcattcatgaaggctacatcactatcaggccaaaaagccagtttgataaca
gattatgttctcaagttgcttggattggatatttgtgctgacaccaaaattggtgatgac
atgacaaggggtatctctggaggacaaaagaagcgagtcacaacaggggagatgctagct
ggaccggcaaaaacacttttcatggatgaaatatcaacaggattagatagttcaacaact
tttcaaataaccaagttcatgagacaaatggttcacatattagatgtaacaatggtgatt
tctcttctacaaccagcaccagagacatttgaactctttgatgacattatactactttca
gaaggtcaaattgtataccaaggaccgcgtgaaaacgtgttagagtttttcgaaaccatc
ggtttcaaatgtccttcaagaaaaggagtagcagattttttacaagaagtgacatcgaaa
aaagaccaacaacaatattggttcagaaacgataaaccttacagatatgtttcagtttct
gaatttgttgattgttttaattcatttcatatcggagagaaacttgtggaagaacttaag
gttccttatgataaaagaaaaactcacccagctgcattagtgaaagaaaagtttggaata
tcaaattgggaactattgaaggcatgtttatcaagagaatggttacttatgaaacgcgga
aatgctgtttttgtattcagaaatatacaattagcaatgatggcgattttcctagctacc
ttgttccctagaactatcatgccttttggaagtgttgaagatggacaaaaatactttgga
gcattgttttttactatgtcgactatgatgtttcatggtggagctgaacaatccttgctt
gttgacaggcttcctgtcttttacaaacaaagggatttcatgttctttcctgcatgggca
tttgggttacctatgtggcttcttaggatccccttctcatttattgaaccaatcatttgg
attctacctacatactatacaattggatttgctccatcagctagcagattatttcgacat
tatctcgtatgtgttagcattaacaacatgtctcttggtctatttcgacttgttggtgct
attggtagaacacaagttctttcaaacatacttgctggtttgacctatcaacttgtattt
gttcttggaggattcatcgtcgctaaaaatgatattaagccatggatgttatggggctat
tatgtttctcctatgtcatatggtcaaaatgccattgtaataaatgaatttttagatgaa
agatggagcaaaccaattacagaccctatagataatgcaactactgttgggaaattactt
cttaaagctagaggattttatacacaagactattggtattggatatgcattggagccttg
tttggattttctcttcttttcaactctctcttcattctcgcaataacttatttgaatcct
atagatggttcaaatgcattcgtcgaggatgaaggtgacgcgaagaatgagaatttaacc
cttatacaaaatacaaataaaggttctgcagaaagtagttctttaaatgaagaacgaaga
aagggaatggttttaccgtttcaacctctttcacttgcattcaatcatctgaactactgt
gtagatatgcctgttgaaatgaagagtaagggaatcaatgaagatagacttcaactacta
catgatgttagtggtgctttcagacctggaatattgacagcacttatgggtgttagtggt
gccggaaagacaaccctcatggatgtattagccggaagaaaaacaggcggatacattgaa
ggaagtattaacatttctggttatccaaaaaatcaaacaacatttgctcgagttagtggt
tattgtgagcaaaatgacattcattctccctatgttactgtctatgaatctttactattt
tctgcatggcttcgtcttccttcagacattgacacaaaaacaagaaagaggtttgttgaa
caagtcatggaattagttgagcttacaccaatcaaagatgcacttgtaggctttccaaga
gtgaatggtttatcaacagaacaaagaaaaaggcttactattgctgtggaattggtttct
aacccttccatcatcttcatggatgaaccaacatcaggccttgatgctagagccgctgct
atcgtcatgcgaactgttagaaacacagtagacacagggagaactgttgtgtgcacaatt
caccaaccaagcattgacatttttgaagcttttgatgagctattgttgatgaaaagggga
ggacaaattatttatgcaggacctcttggtcatcaatcacataagcttatagaatatttt
gaagctattgagggggttccaaaaatcaatgtcggatataatcctgccgcatggatgctt
gagatcagtagtgcttcaactgaggcccaacttggtgtagattttgcagagatttatgcc
aattctacactttaccgaaggaaccaagagcttatcgaagaaatcagtactcctacacca
ggttccacggacttattcttcccaaccaaatattctcaaccattttttgtgcagttcaaa
gcttgtttctggaaacaatattggtcgtattggagaaatcctccatataattgtgctcga
ttcattttcacaatatcaatcggattattgttcggactcattttttgggataaaggccaa
catttccaaaaacaacaagatttatttaatcttatgggagctatgtttgctgttgtaatg
atcctcggaaccattaatattatgggagtgcaaccagttgttgacatggaacgaattgtc
ttatatcgcgaaaaagctgcaagaatgtattctgaattggcttatgcatttggtcaggtg
gcaatagagataatttacaacttaattcaagcagccatatacactactcttatttattcc
atgattgggtttgaatggaatgcagcaagattcttccttttgtactattttttgtcaatg
tgtttaatcttcctcaccttgtatgggatgatgtcagttgctttaaccccaagttaccaa
cttgcttctatttttagtcctgtcttcaccagtatatggaacttgttttctggctttgtc
attcctaggacgcaaattcctaaatggtggagatggttctattgggcttctcccaatgct
tgggcaatctatggcatagttacatctcaattaggtgacaaaaatgatcaaattgaagtc
ccaggagttggatacatgagtgttaaggaatttctcaaacaaacttatggttttgaatat
gactttttaccttgggttgctattgctcatgtgggttgggttcttcttttcttgtttttt
ttcgcatatgccatgaaattcctaaactttcaaaaaagatag
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