Trifolium pratense (red clover): 123890630
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Entry
123890630 CDS
T08949
Name
(RefSeq) sister-chromatid cohesion protein 3
KO
K06671
cohesin complex subunit SA-1/2
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123890630
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123890630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
PDS5
HEAT_2
AT_hook
HTH_Crp_2
Motif
Other DBs
NCBI-GeneID:
123890630
NCBI-ProteinID:
XP_045796225
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All DBs
Position
LG6:4836888..4847888
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AA seq
1133 aa
AA seq
DB search
MEDPPPPPAPPSEASTRRPKRGRPPKQPLKEIDTDDEQVERESSPDDFDEEPPIPKSKRN
RTAEGTASASATLKPTDQTLIEAIKGNGKLIPRVVKLWVESYEKDPTSAMVELLTMLFEA
CGAKYHDKSDLMHEIDVDDVIVALVKCAQLGELKDYQSSKKKEFKNFKENLESFWDSLVR
ECQHGPLFDQVLFDKCMDYIIALSCTPPRVFRQVASLMGLSLVTSYITIANMLGVQRETT
RRQLDAEKKKKTEGPRMESLNKRFSDMHEKITLLEEMMRKIFTGLFVHRYRDVDPNIRMS
CIESLGAWILSYPSLFLQDLYLKYLGWTLNDQNAGVRKASIRALQNLYETDDNIPTLGLF
TERFSGRMTELADDIDVAVAVQAIGLVKQLFRHQLIAEDDLGHLYDLLIDDPPEIRHATG
ALVYDHLIAQKFNSSQSGSKGENDNSSKVHLDRMLRILEELPPNPIMTIYVIDDVWDYMK
AIKDWKCMISMLLDENSSMSDKGATNLVQLLCASVKKAIGERIVPAVDNRKQYHSKAQKE
VFENNKQDITVAMMKNYPLLLRKFISDKAKVSLLVEIVLSMKLELYSMKRQEQNFKNVLQ
LMKEAFFKHGDKDPLRACVKAIHFCCTESQGELQDFARNKLKELEDEIIAKLKSAIREVV
DGGDEYSLLVNLRRLYELQLSRYVPIDNLYEEIVMVLRDFRNMEDEVVGLLLQNMYFHLA
WSVQSIIDGESVSAASLNSIVSKRDTLLQELVYFVNLATESNEGGKGGSELAGRVCIVLP
ETWCLLKMEKYRKTELERLGYQPNADVVQKFWELCQQQLNVSDEVEDDDVNKDVTKEYSE
ETNKCAVLLAACKLIASNIVPKDYLAPEVISHFVMHGAHVADIIKHLITFLKKREDDWSA
IFLEALKKAYHWHTVDSSGNEDISSENSFLECKNLAVELSGTFIGAARNKHMSDILKLVK
DGIEYAFVDAPKQLSFLEAAVVHFVPKLPASDVLKIKNDVEKRTENVNKDENPSGWRPYC
TFVEVLREKCAKSEVVQDEKEGVSVKRRGRPRKMQNMAGKKLFNDHSSSEDDDSISSSEE
EDEDAPLIHSIRRSSKLRSLGLSREGSKGQTKTGNSVGAVDNISASRTSGASN
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcctcctccacctccggcaccaccgtccgaagcatcaactcgtcgtcccaag
agaggtagacctccgaagcaacctctcaaggaaatcgacaccgacgatgagcaagtggaa
cgagagagttcgcctgatgatttcgatgaagaacctccgattccgaaatctaaacgaaat
cgcactgccgaaggaactgctagcgctagtgccacgcttaaacctaccgatcagactttg
attgaggcgataaaaggtaatggcaaacttattcctcgtgtggtcaaactttgggttgaa
agctatgaaaaggatccaacatctgcaatggttgaactcttgacaatgctgtttgaggca
tgtggagccaagtatcacgacaaaagtgatctcatgcatgagattgatgttgacgatgtt
atcgttgctctggtcaagtgtgcccaattgggtgaacttaaagattatcaaagttccaaa
aagaaggagtttaaaaacttcaaagagaatctagaatcattctgggatagtttggtccgt
gaatgtcagcatggaccattgtttgaccaggttttatttgacaagtgcatggactacatc
attgcactttcatgcacccctccaagagtttttcgtcaagttgcttcgctgatgggtctt
tcattggtcacatcatatataactattgctaatatgcttggtgtacaaagagagactact
cgtagacaattggatgctgaaaagaagaaaaaaaccgagggacctcggatggagtcacta
aataaaaggttttcggatatgcatgagaaaataacattgttggaagagatgatgcgcaag
atatttactgggttatttgtgcatcgctacagagacgttgatcccaacattagaatgtca
tgcattgaatcactcggtgcatggatcctgtcatacccatcactttttttgcaggatttg
tacttgaaatatcttgggtggacgctgaatgaccaaaatgctggtgtaagaaaggcttca
ataagagcactgcaaaatctttatgagacggatgataatataccgacccttggtttgttt
actgagagattttctggccggatgactgagcttgctgatgacattgatgttgctgtggct
gttcaggccataggccttgttaaacaactgtttagacatcaacttattgctgaagatgac
ttgggtcatttgtatgatttgctgattgatgatcctccagaaatcaggcatgcgaccgga
gcattagtatatgatcacctgattgctcagaaatttaatagctcccaatcaggatcaaaa
ggtgaaaatgacaattcttctaaggtccatcttgatagaatgttacgaattctggaggag
ttaccacccaatccaattatgacaatttatgtgattgatgatgtgtgggattacatgaaa
gctataaaggattggaagtgcatgatatctatgctccttgatgaaaattcatcaatgtct
gacaaaggtgcaacaaacttggttcaactcctctgtgcatcagtgaaaaaggctattgga
gagaggattgttcctgctgttgataacagaaagcagtaccacagcaaagcccaaaaagaa
gtatttgaaaataataaacaggatataactgttgccatgatgaagaattatccattactc
ttgaggaaatttatttcggataaagctaaagtgtcattgctggttgagattgttttgtct
atgaagcttgagctttattcgatgaagaggcaggaacagaatttcaaaaatgtcctccag
cttatgaaagaggctttttttaagcatggtgacaaggaccctctgagagcttgtgtgaag
gcaattcatttctgttgcacggaaagtcaaggggaattgcaagattttgctcgaaataag
ctaaaggaacttgaggatgaaattattgccaagttgaaatctgcaattagagaagtagtg
gatgggggtgatgaatattctcttcttgtaaatctgagaaggttgtatgaactccaactg
tctagatacgtgcctattgataacctgtatgaagaaattgtaatggtgctgcgtgatttt
aggaatatggaggatgaggttgttggtttgctgcttcagaacatgtattttcacctggct
tggagtgtgcagtccataatagatggagagagtgtttctgctgcatccttaaattctatc
gtgtctaagcgtgatactttattacaagaacttgtatactttgtaaacttggcaactgaa
agcaatgaaggaggtaaaggtggaagtgaacttgctggcagagtatgcattgtgcttcca
gaaacatggtgcttacttaagatggaaaagtataggaagacagagctggaaagattggga
tatcagcctaatgcagatgtggttcagaagttctgggaactttgtcaacaacagcttaat
gtttcagatgaggtagaagatgacgatgtaaacaaagatgtaaccaaagaatactcagag
gagacaaataaatgtgctgttttattggctgcttgcaagctgattgctagtaatattgtc
ccaaaggattatcttgctcctgaggttatttctcattttgtaatgcatggagcacatgtg
gctgatattataaaacatctgatcacatttcttaagaaaagagaggatgattggtctgcc
atttttcttgaagcacttaaaaaggcataccattggcatactgtcgatagctctggaaat
gaagatatttcatcagaaaactctttcttggaatgtaaaaatctagctgttgagctttct
ggaacttttattggtgctgcccggaacaagcacatgtcagacattttaaaacttgtcaag
gatggtattgaatatgcttttgtggatgcgccaaaacaattgtcttttctggaagcggca
gtggtccattttgtgccaaaactccctgcatcagatgtgttgaaaattaagaatgatgtc
gaaaagcgaacagaaaatgtaaataaagatgaaaatcccagtggctggcgtccctattgc
acatttgttgaggtcttacgggaaaaatgtgcaaagagtgaagtcgttcaagatgaaaaa
gaaggggtttctgttaagcgccggggtcgtccacggaaaatgcaaaacatggcaggaaag
aagctttttaatgaccatagctcgagtgaagatgatgattccattagttcatccgaggag
gaggatgaagacgctcctttgatacattcaatcaggcgctcatcaaagttaaggtcgctg
ggactttctagggagggaagcaaaggtcagacaaagacagggaattctgtgggagctgta
gataatatatctgcttctagaacatcaggagcttcaaactag
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