Trifolium pratense (red clover): 123890739
Help
Entry
123890739 CDS
T08949
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03420
Nucleotide excision repair
tpra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123890739
09124 Replication and repair
03420 Nucleotide excision repair
123890739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tpra03051
]
123890739
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123890739
Proteasome [BR:
tpra03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
123890739
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
123890739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_RAD5A
TECR_N
UBA_3
Rad60-SLD_2
Ubiquitin_4
Ubiquitin_2
Dsc3_N
DnaB_2
Motif
Other DBs
NCBI-GeneID:
123890739
NCBI-ProteinID:
XP_045796372
LinkDB
All DBs
Position
LG6:34978173..34982586
Genome browser
AA seq
376 aa
AA seq
DB search
MKINVKTLKGTHFEIQVNPKDTVGDVKKNIEVVQGAAIYPAPQQMLIHQGKVLKDETTLE
ENQVAENSFVVIMLSKNKVSSSGASAASSAPSNPAAPAASSLPPSSTPQPPASTARQGES
NPEQAPAVTPPTNVVSNTYGQAESNLLAGSNLESTIQQILEMGGGSWDRDTVIRALRAAF
NNPERAVEYLYSGIPEQAEAPAVAASTNVGQAENPSVQAPQPAVPTGGPNTNPLNLFPQG
IPNLGANENAGDLEFLRNSQQFQALRTMVQANPQILQPMLQELGKQNPNLMELIQDHQAD
FLRLINEPGGEENLEGQLGSLAPNTITITPEENEAIQRLEDMGFDRDLVLEVFFACNKNE
DLAANYLLDHQNEFDD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaacgtcaagactctcaaagggactcactttgagatccaagtgaaccctaaa
gatacggttggtgatgtgaagaagaatatagaggtagtgcaaggtgctgctatttatcct
gctccacaacaaatgcttattcatcaagggaaagtgcttaaggatgaaactactttggaa
gaaaatcaagttgctgagaatagttttgttgtgatcatgttgagcaagaataaggtatca
tcaagtggagcctcagctgcttcatctgcaccctcaaacccagctgccccagctgcaagt
tctttgcctccttcatcaacacctcagcctcctgcttctactgccagacagggagaatcc
aatcctgagcaagctcctgctgtaactcctcccactaatgtggtgtccaacacgtatggc
caagcagaatctaatctccttgctggaagtaatttagaatcaactattcagcagattcta
gaaatggggggaggaagttgggatcgggatactgtgatccgcgctcttcgagctgcattt
aacaatcctgaaagagctgttgaatatctctattctggcatccccgaacaagctgaagct
ccagcagttgctgcatccaccaatgttggacaggcagaaaacccttcagtccaggctcca
caaccagctgtgcctactggtgggcccaacaccaacccactgaacttgttcccccagggc
attcccaatttgggtgcaaatgaaaatgcaggtgacttggaattcctgcgtaacagtcaa
cagttccaagcattgagaacaatggtgcaagcaaaccctcaaatcttgcagcctatgctt
caggaactgggaaaacaaaatccaaacttaatggagctcatccaagaccatcaagctgac
ttcttacgtcttataaatgagcctggaggagaagagaacctagagggtcagttgggttct
cttgcgcctaacaccatcactatcaccccagaagagaatgaggccattcaacggcttgaa
gatatgggatttgatagagatctcgtgttggaggtgttctttgcttgcaataaaaatgag
gatcttgcagccaactatctattggatcaccaaaatgagtttgatgattag
DBGET
integrated database retrieval system
