Trifolium pratense (red clover): 123890750
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Entry
123890750 CDS
T08949
Name
(RefSeq) peroxisome biogenesis protein 1-like isoform X1
KO
K13338
peroxin-1
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123890750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123890750
Membrane trafficking [BR:
tpra04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
123890750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_lid_3
AAA_16
AAA_22
NACHT
NPHP3_N
AAA_14
RuvB_N
AAA_25
ATPase_2
RNA_helicase
AAA_5
IstB_IS21
nSTAND3
AAA_18
AAA_24
Bac_DnaA
Mg_chelatase
AAA_7
AAA_2
AAA_19
NB-ARC
AAA_28
TIP49
ResIII
AAA_lid_PRS2_C
PhoH
SLFN-g3_helicase
KTI12
GvpD_P-loop
Motif
Other DBs
NCBI-GeneID:
123890750
NCBI-ProteinID:
XP_045796388
LinkDB
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Position
LG6:35094600..35108156
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AA seq
1128 aa
AA seq
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MEFLVEAVGSINDCFVSLPLPLIQTLQSTASSPLPPILVLQLGSPSHPPHCWFVAWSGAS
SSSSAIQVSQQFAECVSLPIHSPVQVKVASNVPHASSVYIEPHTVDDWEILELNSQQAED
QILNQVRIVHEGMRFPLWLNGHTVITFHVGSVFPKNAVVQLMPGTEVEVASKTRKRISDS
AGDSHVGSNSKDHTAKMLLRLQEPNDLCRTSTHVKGVELHVGLTSVAVVHPETAKRFSFN
TLQLVSIVPRVSKENVNNSRTKSNIMKAKGGSAVNEVENGNTDKKEHRQAVVHLLISESV
AKGHVMLAKSLRLYLRASLHSWVYLKACDIILEKTIPSISLCPCRFKLVRQENSVENNGL
DDFHSHKNHIDETLHGKATSGVFLDTRNWLMHSEVVAALFDNPSYREEEEVANQSQNQKG
LQSLVRLWYIAQLEAITSIMGMELNSLVIGSKTLLHFGLSCYQIGSDEKFQPTSSEHGGK
EAEMLFLLTFGEEDLHHGKLNAYEVSLGGRLNNINVEDLKFFERMKLGDPISIHSFDERT
SADHIRSNVPFHGWMEKTASDVINRMLVLLSSTCGLWFGSCNLPLPGHVVIYGPPGSGKT
ILATDVAKSLENHEDILAHIIFVSCSKLALEKVPVIRQELANHITEAINHAPSVVIFDNL
DSIISTPDSEGSQPSMSVAGLTDFLVDIMDEYGEKRRKSCGFGPIAFIATIQSLESIPQS
LSSSGRFDFHIKLPAPAASERKAMLKHVIQRRHLQCNDDILLDVAVKCDGYDGYDLEILV
DRTVHAAVRRFLPSKPIYEHEGPALLQEDFSQAMHDFLPVAMRDITKSVSDDGRSGWDDV
GGLADIRNAIKEMIELPSKFPKTFAQAPLRLRSNILLYGPPGCGKTHIVGAAATASSLRF
ISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVN
QFLTELDGVEILAGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSR
KLPMASDIDLATVANMTEGFSGADLQALLSDAQLAAVHDILDNIDTFGSEKTPVITDALL
KLTASKTRPSISEEEKRRLYSIYHQFLDSKRSVAAQSRDVKGKKATLA
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggagttcttggttgaagctgtgggaagcataaacgactgtttcgtatcccttccctta
cctctaattcaaacccttcaatccacagcttcatctcctcttcctccaattctcgtcctc
cagcttggttctccatcccaccctcctcactgctggtttgttgcttggtctggtgccagt
tcttcctcttcagccatacaagtttctcaacaatttgccgaatgtgtttccttgccgatt
cattctccagttcaagttaaagttgcttctaatgttcctcatgcttcttccgtctatata
gagccacatacggtagatgattgggaaattttggaacttaattcccaacaagctgaggat
caaattctcaatcaggttaggattgttcatgaagggatgaggtttcctttatggttgaat
ggtcacactgtcatcacatttcatgttggttctgtttttcccaagaatgcggtggtacaa
ctcatgccaggaactgaagttgaggttgcttcaaagacgcgcaaaagaatttcggattca
gcgggagattcacatgtaggttccaatagtaaagatcatactgcaaaaatgctgctccgt
ttacaagagccaaatgatttatgtcgtaccagtactcatgtcaaaggtgttgagcttcat
gtagggctcacttcggttgctgttgttcatccagaaacagccaagcgcttctcatttaac
acgcttcagttggtttccatagtgccaagagtatcaaaagagaatgttaataattccaga
accaaatccaatattatgaaagccaaaggtggttcagctgttaatgaagttgagaatgga
aatactgacaagaaggaacatcgacaagcagttgttcatctgttgatttcagaatctgtg
gctaaaggacatgtaatgctagctaagtctcttcgcctttatttgagagctagcctgcat
tcatgggtttatttgaaggcatgcgatattattttggaaaaaactatcccttccatttct
ctttgtccttgtcgattcaaactggtaaggcaggagaattccgttgagaacaatggtcta
gatgattttcacagccataagaatcacattgatgaaacattgcatgggaaagccacttca
ggtgtctttttggataccagaaattggttaatgcacagtgaagttgttgcggctcttttt
gataatcccagttacagagaagaggaagaggttgcaaaccaatcccagaatcaaaaggga
ttacaaagtcttgtacgactatggtatattgcacaacttgaggcaattacttccattatg
gggatggaacttaattcattggttattggtagtaaaacattgcttcattttggattaagc
tgttaccagattgggagtgatgagaagtttcagccgacttcttcagaacacggtggcaag
gaagctgaaatgttatttttattgacctttggtgaagaagatctgcatcatggaaaactt
aatgcatatgaagtttcacttggcggaagactcaataacatcaacgttgaggatctgaag
ttttttgaaagaatgaaattgggtgatcccatttctattcattcttttgacgagagaacc
tctgcagaccacattcgttcaaatgtacctttccatggctggatggagaaaactgcttct
gatgttatcaataggatgctggtattgttatcttcaacatgtggtttgtggtttggctca
tgcaacctgccacttcctggacatgttgtaatatatggacctccgggctctgggaaaact
atactagcaactgatgtggcaaaatcccttgaaaatcatgaagacatcttagcgcacata
atttttgtttcctgctcaaaacttgctctggagaaggtcccagttattcgtcaagaactt
gcaaaccatataactgaagctataaaccatgcaccttctgttgtcatctttgacaatctt
gatagtataatttctacccctgattccgaaggttctcagccatcgatgtctgttgctgga
ctcacagattttctagttgacatcatggatgaatatggggagaagaggcgaaagtcatgt
ggatttggtccaatagctttcatagctaccatacagtccctagagagtataccacaatct
ttgagctcttcagggcggtttgactttcacattaagctgcctgctcctgcagcttccgag
cgcaaagctatgttgaagcatgtaatacaaaggcgacacttgcaatgcaatgatgacatc
ctgcttgatgtggctgtaaaatgtgatggttatgatggctatgatctggaaattttagtt
gatagaactgtccatgctgctgttcgccgttttctgccatctaaacccatttatgagcat
gagggtcctgctttactccaggaggatttctctcaggcaatgcatgattttctcccagtt
gcaatgcgtgacatcacaaaatctgtttctgacgatggccgttctggatgggatgatgtc
ggtggtcttgctgatattcgaaatgctattaaagagatgatcgagttgccatcaaagttt
ccaaaaacttttgcgcaagcaccattaaggttgcggtcaaatatcctcttatatggtcct
cccggttgtggcaaaactcacatagtcggtgctgctgccactgcttcttcgcttcgattc
atatcagtgaaagggccagaactgttaaacaaatacattggtgcttctgaacaagctgtt
agggatatattttctaaagcagctgctgcagccccgtgcctacttttttttgatgaattt
gattctattgctcctaagagagggcacgacaatactggagtaaccgaccgtgttgtcaat
caattcttgaccgagttagacggtgttgagattttagctggtgtatttgtgtttgctgca
accagtagaccagatttactggatgcggcactgttgagaccgggtaggttagatcgtctt
ctattttgtgactttccatcttggcatgagagattggaaattcttacggtactttctaga
aagttaccaatggccagtgatattgatttggctacagtagctaatatgactgagggattc
agtggagctgatctccaggctctcctctcagatgcacagcttgcagcagttcatgatatt
ctggacaacattgatacgtttgggtcagagaaaacaccagttattactgatgctcttcta
aagctcactgcatccaagaccaggccatctatttcagaggaagagaaaagacgactctac
agtatttatcaccagttcctggattcaaagagatctgttgctgcccagtcaagggatgta
aaaggcaagaaggcaactctagcctga
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