KEGG   Trifolium pratense (red clover): 123890849
Entry
123890849         CDS       T08949                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    123890849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123890849
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     123890849
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_DCAF12 RAWUL WD40_MABP1-WDR62_1st WDR90_beta-prop_4th DUF7165
Other DBs
NCBI-GeneID: 123890849
NCBI-ProteinID: XP_045796509
LinkDB
Position
LG6:1696232..1706844
AA seq 765 aa
MHRVGSTGNANNSTRPRKEKRLTYVLNDSDDTKHCAGINCLALLTPTIPDGSDYLFTGSR
DGRLKRWALAEDAATCSATFESHVDWVNDAVLVGDNTLVSCSSDTTLKTWNALSTGTCVR
THRQHTDYVTCLAAAGKNGNIVASGGLGGEVFMWDIEAALAPVSKCNDATVDESSNGIHG
SANSLPSTNLRNISSSNSISLHTTQTQGYIPIAAKGHKESVYALAMNEGGTILASGGTEK
VVRLWDTRSGSKKLKLKGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDIGQQRCVHSYAV
HTDSVWALASTPTFSHVYSGGRDFSLYLTDLQTRESSLLCTGEHPILQLALDNDSIWVAS
TDSSVHRWPAEGCNPQKIFQRGNSFLAGNLSFSRARVSLEGSTPVPIYKEPTLTIRGTPG
IVQHEVLNNKRHVLTKDTSGSVKLWEITKGVVVEDYGKVSFKEKKEELFEMVSVPAWFTV
DTRLGSLSVHLDTPQCFSAEMYSVDLNIIGKPEDDKVNLGRETLKGLLTHWLRKRKQRNG
SPAPANGELSVKDVASRSLIHSRAEVDVSSENDAMVYPPFEFSVVSSPSIVTEGTHGGPW
RKKITDLDGTEDEKDFPWWCLDCILNNRLPPRENTKCSFYLHPCEGSPVQILTQGKLSAP
RILRIHKVINYVVEKMVLDKPLDNLHADGNFASGLAGSQSQLQAVGDGSFRSGSGFKPWQ
KLRPSIEVLCNNQVLSPDMSLATVRAYIWKKSDDLVLNYRVVQGR
NT seq 2298 nt   +upstreamnt  +downstreamnt
atgcatcgcgtgggtagtacgggtaacgcgaacaattcaactcgccctcgaaaggagaag
aggttaacatatgtgttgaacgattccgatgacacaaagcattgtgcaggcataaattgt
ctggccctacttacgcccacaatacccgatgggtcagattatctattcaccggaagccgt
gatggcaggctaaaacgatgggcacttgctgaggacgcggcaacatgctctgctaccttt
gaatctcatgtggactgggttaacgatgctgttcttgtcggtgacaacacacttgtttcc
tgttcttcagatacaacccttaagacatggaatgctttgtccaccggaacttgtgttagg
acgcaccgccaacacactgattatgttacttgcctcgcagcagctggaaaaaatggcaat
attgttgcctctggtggccttggtggggaggtttttatgtgggatattgaagctgcgctt
gctccagtctctaagtgcaatgatgctacggttgatgaatcttcaaatggtatccatggt
tctgccaactcactaccttcaacaaacttacgtaatatcagctcaagcaacagtatatcc
ttgcacactactcaaactcaagggtacattccaattgctgcaaaaggccataaggagtct
gtttatgcattggccatgaatgaaggtggaacaattcttgcctctggtggcacagaaaag
gttgtacgtctctgggacacaaggtcaggatcaaagaagctaaagcttaaagggcacaca
gataacatcagggctctacttctggattctactggcaggttttgcttatcaggatcttca
gactctatgataaggctttgggatataggtcagcagagatgtgttcattcttatgcagtt
catacggattctgtttgggcacttgccagcaccccgacatttagtcatgtttatagtggt
ggaagagacttttcgttatacttgacagatttgcaaacaagagagagtagtttgctttgc
accggcgagcaccctattcttcaattggctttggacaacgatagcatatgggttgcctca
acagattcttcagttcatagatggcctgctgaaggatgcaaccctcaaaagattttccaa
agaggcaattctttcttagcaggaaacttgtccttttcaagagcaagggtgtcactagaa
ggatctacacctgttcctatatataaagaacccaccttaactatcaggggcacccctgga
atagtgcaacatgaagttttaaataataagaggcatgtgctgacaaaggatacatctggt
tcagtgaagctttgggagattaccaaaggtgttgtggttgaagattatggaaaggtttca
tttaaggagaaaaaggaagagctatttgagatggtaagcgttcccgcatggttcacagtg
gataccaggcttggaagtttgtcggtccatttggatactccccaatgcttttctgcagag
atgtattcggtagatcttaacatcattggcaagcctgaagatgacaaggttaatttgggc
cgagaaaccctaaaaggactcttgactcattggctgagaaaacggaaacaaagaaatggg
tctccggctccagctaatggggaattatctgtaaaggatgttgcttctagaagtcttatc
cattcgagagctgaggttgatgtgagttctgagaatgatgctatggtttatcctccattt
gaattctcagttgtttcctctccttcgatcgttactgagggtactcatggaggtccttgg
aggaaaaaaattactgatttagatggaacggaggacgagaaagactttccctggtggtgt
ctagattgcattttgaataaccggttacctcccagagaaaatactaaatgcagtttctat
ttgcatccatgtgaaggctctccagtccagatcctgacacaagggaagctaagtgctcca
cgtatattaagaattcacaaagttatcaattatgttgttgaaaagatggtgctcgataaa
cctttggataacttgcatgctgatggtaattttgcctctggacttgctgggtcacagtca
caacttcaagcagttggagatggatctttccgatctggatctggattcaaaccttggcaa
aagcttagaccttcaattgaagtattgtgcaacaatcaggtgttatctcctgatatgagc
ctggccacagtgcgagcttatatatggaagaaatcagatgacctggtcctaaattacaga
gtggttcaaggcaggtga

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