Trifolium pratense (red clover): 123890853
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Entry
123890853 CDS
T08949
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123890853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123890853
03036 Chromosome and associated proteins [BR:
tpra03036
]
123890853
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
123890853
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
123890853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
123890853
NCBI-ProteinID:
XP_045796516
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All DBs
Position
LG6:1737974..1747971
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AA seq
1189 aa
AA seq
DB search
MDDSVNNVAQAIATALNWSSTPDARQSALSFLDSMKTSGDIRTLANTLFLLVKKNWSAEI
RLHAFKMLQHLVRLRWEELNPEEHKNFAKLSIDLMYEIADPCEDWALKSQTAALVAEIVR
REGLVLWQEMLPSLVTLSSKGPIQAELVSMMLRWLPEDITVHNEDLEGDRRRLLLRGLTQ
SLPEILPLLYTLLERHFVAALNEAGRKQTDIAKLHAAAVTATLNAVIAYAEWAPLTDLAK
SGIINGCGFLLSAPDFRLHASEFFKLVSSRKRSVDASASEIDQVMRDIFQLLMNISRDFL
HKSGSGPSSIDEGEYEFAECICESMVSLGSFNLQSIAGDSGILSLYLEQMLGFFNNYKFA
IHFQSLQFWLMLMRDIMSKPKNSTHSAADSSAVSGSGSENAKKKTLSFVNDDFCGAMFDT
SFPRLLKREKILPGTALSLGALELWSEDFDDKSKFSQYRSRLLELIKFVASYKPLIAAAK
VSGKIDTIIKSFLVSPAPTQDLAVLESMHLALENIVNAVFDRSSDIAEANAEIQFALCRT
FEGLLQQFISLKWTEPALVEILVRYLEAMGLFLKYFADAAGSVINKLFELLTSLPFEMKD
TSTLSARHARLQICTSFIRIAKAADKSILPHMKGIADTISCLQREGRLLQGEHNLIGEAF
LIMASSAGIQQQQEVLKWLLEPLSQQWTQLEWQDRYLSSPHGLVQLCSEAPVMWSIFHTV
TFFERALKRSGLKKAHGLLENSSTSDSTTLNPMASHVLWMLTPLLKLLRGLHSLWSPSII
QTLPGEISAAMAMSDFERFSLLGEENPKLPKNPKEGYGEQNESDIRNWFKGIRDSGYNVL
GLSTTIGDSFFKNLDVHSVVVALMENIQSMEFRHLRQLVHSILIPLVKHCPVDMREIWLE
KLLHPLFVHIQQALSCSWSSLLQDGRAKVPDICGFPSGSDLKVEVMEEKILRDLTREMCS
LLSVIASPPLNTGIPSLEQSGHIIRFDMSSVKSLDAVASCSLVGFLLKHEGLALPTLRMC
LEVFTWTDGEAVTKISPFCSAAVALSIVTNHTELIEYVSRDLFTSVIQGLSLESNAIISS
DLIAICREIFVYLSDRHPAPRQILQSLPFITPHDLHAFEEALTKTSSPKEQKQYMKSLLL
LATGNKLKALAAQKSVNIITNVSMRPRSSANAPESNVHDGDVVGLAAII
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagtgttaacaatgtcgctcaagccatagccaccgctctcaactggtcttct
actcccgatgctcgtcaatccgctctctcttttctcgattccatgaaaacaagtggtgat
ataaggacattagcaaacacattgttccttttggtgaaaaagaattggtcagctgaaatt
cggttgcatgctttcaagatgctgcagcatttggtgcggttgaggtgggaagaattaaac
ccggaagagcacaagaattttgcaaagctctcgattgatttaatgtatgagattgcagat
ccttgtgaagattgggctcttaaaagtcagacagctgctcttgttgctgagatagttaga
agagagggtcttgttctatggcaagaaatgcttccatctttggttactctatccagcaag
ggtccaatacaagctgagttggtttcaatgatgctgcggtggcttcctgaggacattaca
gtccacaatgaggacttagaaggtgaccgccggaggctacttttacgcgggctaactcaa
tcattgcctgaaattttgccactattgtacactttactagaaaggcactttgtagccgca
ctaaatgaagctggtagaaaacagactgacattgccaaactgcatgctgctgcagtaaca
gctactttaaatgccgtaattgcatatgctgagtgggctccattgaccgatcttgctaag
tctggtatcattaatggttgtggtttcctactatctgctccagactttcgtcttcatgca
tctgagtttttcaaacttgtttcgtcgaggaagagatctgttgatgcatctgcttctgaa
attgaccaagttatgagggacatctttcaattattgatgaatatatctagggattttttg
cacaaatctggttcaggtcccagttctatagatgagggtgaatatgaatttgctgaatgc
atatgtgaaagtatggtgtcactgggttcctttaacttgcaaagtattgctggagatagt
ggcatactttcactctatctagaacagatgctaggatttttcaacaattacaagtttgca
attcattttcaatccctgcaattctggttgatgctaatgagggatataatgtcaaagcca
aaaaattcaactcattcagctgctgacagttcagctgttagtggctcaggttctgagaat
gcaaagaagaagactctaagctttgtgaatgatgatttttgtggtgcaatgttcgatact
tctttccctcgcttgctcaaacgagagaaaattttgcctggaactgcactttctttaggg
gcattggagttgtggagtgaagattttgacgacaagagtaaattcagccagtatcgttct
aggctgttggagctgattaaatttgttgcttcgtacaaacccctgatagctgctgctaaa
gtttctggaaaaattgatacaataatcaagagtttcttggtttcaccagcgccaactcag
gacttagctgtgttggaaagcatgcacttggctttagagaatattgtaaatgctgttttt
gacagatccagtgatattgccgaggcaaatgctgaaattcagtttgctttatgtagaaca
tttgaaggtttactccaacaatttatttccttgaaatggacggagcctgcacttgtggaa
atacttgttcgctatttggaagcaatgggcctctttttgaagtattttgcagatgcagct
ggcagtgttatcaataaactatttgaacttctaacatctcttccctttgaaatgaaggat
acgtcaacattaagtgctcggcatgcaaggttgcagatctgtacatcatttattcggata
gcaaaagctgctgacaaaagcatcttgcctcatatgaagggcattgctgataccatttct
tgtttgcaaagggaaggtcgtttacttcagggcgagcataatcttataggcgaagctttt
cttattatggcttcttctgctgggattcaacagcagcaagaagttttaaagtggctacta
gaacctttgagccaacagtggacacaactggagtggcaggatagatatttgtctagtcca
catggtttggttcagttgtgttcagaagcgccagttatgtggtcaatttttcacacagtt
acattcttcgagagggcacttaagaggagtgggttgaagaaagcgcacggacttttagaa
aacagctcaacatcagattcgactactttaaatccaatggcctctcatgtattatggatg
ctaactcctctcttgaaactacttcgaggcttacattctctttggtctccatctataatt
caaactttacctggagagatctcggctgcaatggccatgagtgattttgagaggttcagt
cttcttggagaagagaaccctaaattgccaaagaaccctaaggaaggatacggtgaacag
aatgaatcagacatacgaaattggtttaaaggcatcagagacagtggatataatgtattg
ggcttgtcaacaaccattggggattcatttttcaaaaatttggatgtacactctgttgtc
gttgccctaatggagaatatacagtcaatggagttcaggcatttgaggcagcttgttcat
tccattttgattcctttggttaaacactgtcctgtggatatgagggagatttggctggaa
aagcttctgcacccattatttgttcatattcagcaagctcttagctgttcatggtctagt
cttctgcaagatggtagagcaaaggttcctgatatctgtggctttcctagtggatcagac
ctgaaagtagaagtgatggaggaaaaaatcttgagggatctcacacgtgaaatgtgttca
ctcctctctgtgattgcttctcctcccctaaacacaggaatcccttctttggaacagtct
gggcatattattcgttttgacatgtcttctgtgaaaagcttggatgcagttgcatcatgc
tctttggttggtttccttctaaagcatgaaggtcttgcccttccaacactaagaatgtgt
ttagaagtttttacatggacggatggtgaagccgtaacaaagatttctcctttttgctct
gcggcggtagctctttcaatagtaacaaaccatactgaactcatagaatacgtttcgaga
gatctttttacatcggttattcaaggtttatccctagaatcaaatgcaataatcagttct
gatctaattgccatttgccgagagatatttgtatatctctccgatagacacccagccccc
aggcagattttgcagtctctcccctttattactcctcatgatttacatgcctttgaggaa
gctttaacaaaaacgtcaagtccaaaggaacaaaagcagtacatgaaaagcttgcttcta
ttggcaactggcaacaaattaaaagcacttgcagcacagaaaagtgtgaacatcattaca
aatgtttctatgagaccacgcagctcggccaatgctcccgaatccaatgttcatgatggt
gatgttgttggtttggcagccattatctga
DBGET
integrated database retrieval system