KEGG   Trifolium pratense (red clover): 123890853
Entry
123890853         CDS       T08949                                 
Name
(RefSeq) protein HASTY 1
  KO
K14289  exportin-5
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123890853
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tpra03016]
    123890853
   03036 Chromosome and associated proteins [BR:tpra03036]
    123890853
Transfer RNA biogenesis [BR:tpra03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    123890853
Chromosome and associated proteins [BR:tpra03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     123890853
SSDB
Motif
Pfam: Exportin-5 Xpo1
Other DBs
NCBI-GeneID: 123890853
NCBI-ProteinID: XP_045796516
LinkDB
Position
LG6:1737974..1747971
AA seq 1189 aa
MDDSVNNVAQAIATALNWSSTPDARQSALSFLDSMKTSGDIRTLANTLFLLVKKNWSAEI
RLHAFKMLQHLVRLRWEELNPEEHKNFAKLSIDLMYEIADPCEDWALKSQTAALVAEIVR
REGLVLWQEMLPSLVTLSSKGPIQAELVSMMLRWLPEDITVHNEDLEGDRRRLLLRGLTQ
SLPEILPLLYTLLERHFVAALNEAGRKQTDIAKLHAAAVTATLNAVIAYAEWAPLTDLAK
SGIINGCGFLLSAPDFRLHASEFFKLVSSRKRSVDASASEIDQVMRDIFQLLMNISRDFL
HKSGSGPSSIDEGEYEFAECICESMVSLGSFNLQSIAGDSGILSLYLEQMLGFFNNYKFA
IHFQSLQFWLMLMRDIMSKPKNSTHSAADSSAVSGSGSENAKKKTLSFVNDDFCGAMFDT
SFPRLLKREKILPGTALSLGALELWSEDFDDKSKFSQYRSRLLELIKFVASYKPLIAAAK
VSGKIDTIIKSFLVSPAPTQDLAVLESMHLALENIVNAVFDRSSDIAEANAEIQFALCRT
FEGLLQQFISLKWTEPALVEILVRYLEAMGLFLKYFADAAGSVINKLFELLTSLPFEMKD
TSTLSARHARLQICTSFIRIAKAADKSILPHMKGIADTISCLQREGRLLQGEHNLIGEAF
LIMASSAGIQQQQEVLKWLLEPLSQQWTQLEWQDRYLSSPHGLVQLCSEAPVMWSIFHTV
TFFERALKRSGLKKAHGLLENSSTSDSTTLNPMASHVLWMLTPLLKLLRGLHSLWSPSII
QTLPGEISAAMAMSDFERFSLLGEENPKLPKNPKEGYGEQNESDIRNWFKGIRDSGYNVL
GLSTTIGDSFFKNLDVHSVVVALMENIQSMEFRHLRQLVHSILIPLVKHCPVDMREIWLE
KLLHPLFVHIQQALSCSWSSLLQDGRAKVPDICGFPSGSDLKVEVMEEKILRDLTREMCS
LLSVIASPPLNTGIPSLEQSGHIIRFDMSSVKSLDAVASCSLVGFLLKHEGLALPTLRMC
LEVFTWTDGEAVTKISPFCSAAVALSIVTNHTELIEYVSRDLFTSVIQGLSLESNAIISS
DLIAICREIFVYLSDRHPAPRQILQSLPFITPHDLHAFEEALTKTSSPKEQKQYMKSLLL
LATGNKLKALAAQKSVNIITNVSMRPRSSANAPESNVHDGDVVGLAAII
NT seq 3570 nt   +upstreamnt  +downstreamnt
atggatgatagtgttaacaatgtcgctcaagccatagccaccgctctcaactggtcttct
actcccgatgctcgtcaatccgctctctcttttctcgattccatgaaaacaagtggtgat
ataaggacattagcaaacacattgttccttttggtgaaaaagaattggtcagctgaaatt
cggttgcatgctttcaagatgctgcagcatttggtgcggttgaggtgggaagaattaaac
ccggaagagcacaagaattttgcaaagctctcgattgatttaatgtatgagattgcagat
ccttgtgaagattgggctcttaaaagtcagacagctgctcttgttgctgagatagttaga
agagagggtcttgttctatggcaagaaatgcttccatctttggttactctatccagcaag
ggtccaatacaagctgagttggtttcaatgatgctgcggtggcttcctgaggacattaca
gtccacaatgaggacttagaaggtgaccgccggaggctacttttacgcgggctaactcaa
tcattgcctgaaattttgccactattgtacactttactagaaaggcactttgtagccgca
ctaaatgaagctggtagaaaacagactgacattgccaaactgcatgctgctgcagtaaca
gctactttaaatgccgtaattgcatatgctgagtgggctccattgaccgatcttgctaag
tctggtatcattaatggttgtggtttcctactatctgctccagactttcgtcttcatgca
tctgagtttttcaaacttgtttcgtcgaggaagagatctgttgatgcatctgcttctgaa
attgaccaagttatgagggacatctttcaattattgatgaatatatctagggattttttg
cacaaatctggttcaggtcccagttctatagatgagggtgaatatgaatttgctgaatgc
atatgtgaaagtatggtgtcactgggttcctttaacttgcaaagtattgctggagatagt
ggcatactttcactctatctagaacagatgctaggatttttcaacaattacaagtttgca
attcattttcaatccctgcaattctggttgatgctaatgagggatataatgtcaaagcca
aaaaattcaactcattcagctgctgacagttcagctgttagtggctcaggttctgagaat
gcaaagaagaagactctaagctttgtgaatgatgatttttgtggtgcaatgttcgatact
tctttccctcgcttgctcaaacgagagaaaattttgcctggaactgcactttctttaggg
gcattggagttgtggagtgaagattttgacgacaagagtaaattcagccagtatcgttct
aggctgttggagctgattaaatttgttgcttcgtacaaacccctgatagctgctgctaaa
gtttctggaaaaattgatacaataatcaagagtttcttggtttcaccagcgccaactcag
gacttagctgtgttggaaagcatgcacttggctttagagaatattgtaaatgctgttttt
gacagatccagtgatattgccgaggcaaatgctgaaattcagtttgctttatgtagaaca
tttgaaggtttactccaacaatttatttccttgaaatggacggagcctgcacttgtggaa
atacttgttcgctatttggaagcaatgggcctctttttgaagtattttgcagatgcagct
ggcagtgttatcaataaactatttgaacttctaacatctcttccctttgaaatgaaggat
acgtcaacattaagtgctcggcatgcaaggttgcagatctgtacatcatttattcggata
gcaaaagctgctgacaaaagcatcttgcctcatatgaagggcattgctgataccatttct
tgtttgcaaagggaaggtcgtttacttcagggcgagcataatcttataggcgaagctttt
cttattatggcttcttctgctgggattcaacagcagcaagaagttttaaagtggctacta
gaacctttgagccaacagtggacacaactggagtggcaggatagatatttgtctagtcca
catggtttggttcagttgtgttcagaagcgccagttatgtggtcaatttttcacacagtt
acattcttcgagagggcacttaagaggagtgggttgaagaaagcgcacggacttttagaa
aacagctcaacatcagattcgactactttaaatccaatggcctctcatgtattatggatg
ctaactcctctcttgaaactacttcgaggcttacattctctttggtctccatctataatt
caaactttacctggagagatctcggctgcaatggccatgagtgattttgagaggttcagt
cttcttggagaagagaaccctaaattgccaaagaaccctaaggaaggatacggtgaacag
aatgaatcagacatacgaaattggtttaaaggcatcagagacagtggatataatgtattg
ggcttgtcaacaaccattggggattcatttttcaaaaatttggatgtacactctgttgtc
gttgccctaatggagaatatacagtcaatggagttcaggcatttgaggcagcttgttcat
tccattttgattcctttggttaaacactgtcctgtggatatgagggagatttggctggaa
aagcttctgcacccattatttgttcatattcagcaagctcttagctgttcatggtctagt
cttctgcaagatggtagagcaaaggttcctgatatctgtggctttcctagtggatcagac
ctgaaagtagaagtgatggaggaaaaaatcttgagggatctcacacgtgaaatgtgttca
ctcctctctgtgattgcttctcctcccctaaacacaggaatcccttctttggaacagtct
gggcatattattcgttttgacatgtcttctgtgaaaagcttggatgcagttgcatcatgc
tctttggttggtttccttctaaagcatgaaggtcttgcccttccaacactaagaatgtgt
ttagaagtttttacatggacggatggtgaagccgtaacaaagatttctcctttttgctct
gcggcggtagctctttcaatagtaacaaaccatactgaactcatagaatacgtttcgaga
gatctttttacatcggttattcaaggtttatccctagaatcaaatgcaataatcagttct
gatctaattgccatttgccgagagatatttgtatatctctccgatagacacccagccccc
aggcagattttgcagtctctcccctttattactcctcatgatttacatgcctttgaggaa
gctttaacaaaaacgtcaagtccaaaggaacaaaagcagtacatgaaaagcttgcttcta
ttggcaactggcaacaaattaaaagcacttgcagcacagaaaagtgtgaacatcattaca
aatgtttctatgagaccacgcagctcggccaatgctcccgaatccaatgttcatgatggt
gatgttgttggtttggcagccattatctga

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