KEGG   Trifolium pratense (red clover): 123890882
Entry
123890882         CDS       T08949                                 
Name
(RefSeq) SART-1 family protein DOT2 isoform X1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123890882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpra03041]
    123890882
   04121 Ubiquitin system [BR:tpra04121]
    123890882
Spliceosome [BR:tpra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    123890882
Ubiquitin system [BR:tpra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    123890882
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 123890882
NCBI-ProteinID: XP_045796605
LinkDB
Position
LG1:12663077..12676771
AA seq 912 aa
MDVEWSESRYDDRIDNDDSPAREHYDDADGVDRSSRHRSKDRKKSDKEHRSIEKDRGSGR
ERNRDEREKDRSKDGKVREKDYDREKYREKERERERDRDKKDRGKDRDREKEREIEKDSD
RVREKERGKEKTRDRERDKVKEKEKDREREKHRDRESYRDGDRDKGKDKVREERERETDR
DKDRSRDRGSRRAHEEDYESGNLDDKVDYHEKRDEEVGKHAKSSKPNQDDKDGETSAQLS
SKELEERILRMKETRTKKQSEAASEISSWVNKSRKIEKQRVLQLSKIFEEQDNIAVEGSD
DEDTTHHTDHLAGVKVLHGLDKVAEGGTVVLTIRDQPILADGDVNEGTTAWCSFLYYSCL
NFVSCCVSCKIICFSHMPDTDMLENVEIGEQKRRDDAYKAAKKKTGIYDDKFNDDPSAEK
KILPKYDDPAAEEGLTLDERGRFSGEAEKKLEELRRRLTGVSTNNFEDLTSSGKVSSDYY
SHEEMLQFKKPKKKKSLRKKDKLDINALEAEAIASGLGVGDLGSRKDEKRQAIKDEQERL
AAEMRNNAYQSAYAKADEASKLLRPEQSLNVKTGEDDETPVFADDDEDLRKSLEKARRLA
LKKQEEKGASGPQAIALLASSNPSNETVDDQNSTAGESRENKVVFTEMEEFVWGLHIDEE
ARKPEGEDVFMHDDEDANVPVEEKRDEAGGWTEVKETQKDEQPNSGDKEAIVVPDETIHE
VAVGKGLSGVLKLLKDRGTLKETTEWGGRNMDKKKSKLVGIVEDEGKEAPNKKEIHIERT
DEFGRILTPKEAFRIISHKFHGKGPGKMKQEKRMKQYHEELKLKQMKSSDTPSLSVERMR
EAQALMKTPYLVISGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGNQKVEHFLGLKRKAE
QSSSDTPKKAKS
NT seq 2739 nt   +upstreamnt  +downstreamnt
atggatgtggagtggtctgaatcgcggtacgatgatagaatcgataatgatgattcccca
gcgagggaacattatgacgatgctgatggtgttgataggtctagtaggcataggagcaag
gataggaagaagagcgataaggagcaccggagtatagagaaggatagaggttctggaaga
gaacgtaatagggacgagcgtgaaaaggataggagtaaagatggtaaggtaagagagaag
gattatgatagagagaaatatagggagaaagagcgtgagcgcgagagggatagagataag
aaggaccgtggtaaggatagagaccgtgagaaggaaagggagattgagaaagatagtgac
agggtgcgagagaaggaaagggggaaagagaagactagggatagggaaagggataaggta
aaggaaaaagaaaaggatagggagcgcgagaaacatagagatagagaaagttatagagat
ggggatcgggataaggggaaagataaagttagagaggagagggagagggagactgatcga
gataaagataggtcaagggatagaggaagtagaagggcacatgaggaagattatgaatcg
ggtaatcttgatgataaagtagattaccacgaaaagagagacgaggaggttggcaagcat
gcaaagtcttcaaaacccaatcaagatgacaaagacggtgaaacatcagcacagttatca
tcaaaagaacttgaagaacgtattttgaggatgaaagaaacaaggacaaagaaacaatct
gaagctgcttccgagatctcatcatgggttaataaaagccgtaagattgaaaagcaaaga
gtgttgcaactctcaaagatttttgaggagcaggacaacatcgcagtagagggaagtgac
gatgaggatacgacccatcacactgatcacctggcgggggtgaaagttcttcatggcctt
gacaaagttgcggaaggtggtactgtagttctgactatcagagatcagcctatacttgct
gatggtgatgttaacgaaggtacaactgcttggtgctctttcttatattattcctgtttg
aattttgtgagttgttgcgtgtcatgtaaaataatttgtttttctcacatgccagacact
gatatgcttgagaatgtggaaattggagaacaaaaacgccgagatgatgcttataaagct
gcaaaaaagaaaactggcatatacgatgataagttcaatgatgacccctctgcagaaaag
aaaatacttccaaaatatgatgatccggctgctgaagagggtttaactttggatgaaaga
ggaagattctcaggtgaagctgaaaagaaacttgaagagctccgtagaaggttaactggt
gtttctactaataactttgaagaccttacttcatctggaaaggtatcatcggactactat
tctcatgaagaaatgcttcaatttaagaagcccaagaagaaaaagtccttgcggaaaaaa
gataagctggacattaacgcccttgaagctgaagctatcgcttcaggattgggtgttggt
gaccttggttctcggaaagatgaaaagaggcaagccatcaaagatgaacaagaaagattg
gcagctgaaatgagaaataatgcttaccagtctgcttatgctaaagcagatgaagcctcc
aaattacttcgtccagaacaatctctgaatgttaaaacaggggaagatgatgaaacccca
gtttttgcagatgatgacgaggatcttcgtaaatccttagagaaagcaagacgactagct
cttaagaaacaggaggagaaaggagcatctggccctcaagctattgctttacttgcctcc
tcaaatcctagtaatgagactgttgatgatcaaaattctacagcgggagagtcgagagaa
aataaggtggtctttacagagatggaagaatttgtctggggtcttcacattgatgaagaa
gcacgcaagccagaaggtgaagatgttttcatgcatgacgacgaagatgcaaatgttcct
gttgaggaaaagagagacgaggctggtgggtggactgaagttaaagaaactcaaaaagac
gagcaacccaactcaggagacaaggaggctatagtagttcctgatgaaactatacatgaa
gttgctgtagggaaaggactgtcaggtgtattgaaactgcttaaagatcgaggaacacta
aaagaaaccactgaatggggtggcagaaacatggataagaaaaaaagcaaattggttggg
attgtagaggatgaaggaaaggaagcaccgaataaaaaggagattcacattgagaggaca
gatgagtttgggagaattctgactcctaaggaagcgttccggataatttctcataagttc
catggtaaaggacctggcaaaatgaagcaggaaaagcgaatgaagcaatatcatgaagaa
ttgaaattgaagcaaatgaagagttcagatacaccgtcactgtctgtggagagaatgagg
gaagctcaagctcttatgaagacaccatatctcgtaatcagtggtcatgttaaaccagga
caaactagtgacccgaaaagtggttttgctacagtcgagaaggatcttcctggaggcttg
acacctatgctcggcaatcagaaggttgagcactttttgggactcaagaggaaagccgaa
caatcgagctcggacacccccaaaaaggcgaaatcttga

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