Trifolium pratense (red clover): 123890977
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Entry
123890977 CDS
T08949
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123890977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123890977
Spliceosome [BR:
tpra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123890977
Complex C
U4/U6.U5 tri-SnRNP related factors
123890977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
C2H2-zf_KIN17
Topoisom_I_N
C2H2-2nd_BIRD-IDD
N6_N4_Mtase
Motif
Other DBs
NCBI-GeneID:
123890977
NCBI-ProteinID:
XP_045796702
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All DBs
Position
LG6:complement(2744189..2748145)
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AA seq
191 aa
AA seq
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MSNNVAGVDNTFRRKFDPEEYRELARERERKEEPKGHVQRKPLKHRDYEVNLTSSLGKTQ
VVTPVAPLSQQAGYYCRVCECVVKDSANYLDHINGKKHQRMLGMSMRAERSSLKQVQERF
QVLKKRKDIGAFTEKDFDDRVLKHQEEEEERKRLRREKKKEKKKEAVEEPEMDPDVAALM
GFGGFRSSNKK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaatgtcgctggagttgacaacacattcagaagaaaatttgatcctgaagag
tatcgtgaacttgctcgggagcgtgagaggaaggaagaacctaaaggtcatgtgcagagg
aaacccttgaaacatagggattatgaagtaaaccttacatcttccttaggaaagactcag
gttgtgacgccggttgcaccactaagccaacaggctggatattactgccgagtttgtgag
tgtgtggtgaaggactctgcaaactacttggatcatattaatggaaaaaaacatcaaaga
atgctgggcatgtctatgcgagctgaacgttcttctctcaaacaggttcaggaacgtttt
caagttcttaagaaacgtaaagacattggagcctttacagagaaagattttgatgacagg
gtcttaaaacaccaagaagaagaggaagaaagaaagcgactgcgtcgggaaaagaaaaaa
gaaaagaagaaggaagctgtagaagaacctgaaatggatcctgatgttgctgccttgatg
gggtttggtggtttccgctcatctaacaaaaagtga
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