Trifolium pratense (red clover): 123891022
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Entry
123891022 CDS
T08949
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
Organism
tpra
Trifolium pratense (red clover)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
zf-CCHC
ResIII
CMS1
YgbB
zf-CCHC_2
ERCC3_RAD25_C
Cas3-like_C_2
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
123891022
NCBI-ProteinID:
XP_045796758
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Position
LG6:3138093..3144122
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AA seq
773 aa
AA seq
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MASITVIGASSAYKHPSLEPHKKKLSSISTSSVKFHSLDSNKSRHVTNTLLRHNNRLANF
NSSSSSDRFIPSAVATPNSSSSSLLSDEAFQGLGGPRSFDGDDEEDDDFPSRTASISSDE
LDISKLDLPSQLVDSLRKRGITELFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII
NGLDDGEDSGPYSSSRRLPRALVLAPTRELAKQVEKEIKESAPYLKTVCVYGGVSYVTQQ
SALSRGVDVVVGTPGRLIDLINGNTLRLNEVEYLVLDEADQMLAVGFEEDVEVILEKLPP
KRQSMLFSATMPTWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYALSATATSKRTILS
DLITVYAKGGKTIVFTQTKRDADEVSLALTNSITSEALHGDISQHQRERTLNGFRQGKFT
VLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGTAILMYTGSQRRTV
RSLERDVGCKFEFVNAPSMEDVLEASAEQAVVTLDRVHPESIAFFTPTAEKLIEEKGTTA
LAAALAQLSGFAQPPSSRSLITHEQGWVTLQLTRDSENSQRYFSVRSVTGFLNDVYSKAA
DEVGKIHLIADERVQGAVFDLPEDIGKELLEKDVPPGNTISKVTKLPALQDDGPASDFYG
KFSDRERSNRRGSRDGRGGFRSSRGWDGGRGQGRGSDDDFGDSSRRGGRSYKSGNSWSKP
ERSSRDDWLIGGRQSSRSPSSPNRSFDGACFNCGESGHRASDCPTKRGGGGFY
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatcactgtaatcggcgcttcctctgcatacaaacatccctctctcgaacca
cacaagaaaaaactatcatccatttccacttcctcagttaaattccactctctcgactcc
aacaaatcccgccacgtcaccaacactctcctcagacataacaaccgtctcgccaatttc
aactcctcctcctcctccgataggtttattccttctgctgttgctactccaaattcttcc
tcttcttcacttctcagtgatgaagcatttcaaggattaggaggacctagaagcttcgac
ggtgatgatgaagaagatgatgatttcccttcacgaactgcttctattagctccgatgaa
cttgacatttctaaactcgatttgccttcgcaacttgtggattcacttcgtaaacgtggg
attactgagctttttcctattcagagagctgtgttagttcctgcactacaaggtagagat
atcattgctcgtgcaaagactggaacagggaaaacattggcttttggaattcctattatt
aatggtctcgatgatggtgaagattcgggtccttacagcagtagcaggcgtcttcctaga
gccttggtccttgcacctaccagggagttagcaaagcaagtggagaaggagataaaagaa
tctgcgccttatctcaaaacagtttgtgtttatggaggtgtttcttatgttactcaacag
agtgcactttcacgtggtgttgatgtggttgttggaactcccggcaggctgattgacctc
atcaatgggaacacacttaggttgaatgaagttgagtatttggtactcgacgaagctgat
cagatgcttgctgttgggtttgaggaggacgtggaagtcattttggaaaagcttccacct
aagagacaaagcatgcttttttctgcaaccatgcctacttgggtcaaaaaattggccagg
aaatatttgaacaatccattgactattgatttggttggcgatgaagaagaaaagcttgct
gaagggataaaactttatgctttgtcagccactgccacttcaaagcgaacaattctttct
gatcttattaccgtttatgcaaagggtgggaagactatagtttttacacagacaaaaaga
gatgctgatgaagtatcgttggcattaacaaatagtatcacatctgaggcactgcatggc
gatatatctcagcaccagagagagagaacattgaatggtttcagacaaggaaaatttaca
gtgcttgttgccactgatgttgcatctcgtggacttgatattcccaatgttgatttgatt
atccattatgagcttccaaatgatcccgagacttttgtacatcgttctggtcgtactggc
cgtgcaggaaagctaggtacagccattctgatgtacacgggtagccagaggagaacagtt
agatcccttgagcgtgatgtaggatgcaaatttgaatttgttaacgcaccgtctatggaa
gatgttttggaggcatccgctgagcaagctgttgtcacacttgatagagttcatcccgag
tctattgcatttttcactccaactgcagagaaactgattgaagaaaaaggaacaactgcc
cttgcagctgcactggcacaactgagcggattcgcccaacctccgtcttcccggtctctt
atcacccatgaacagggatgggttacattgcaattaactcgagattcagaaaattctcaa
agatatttttcagtaagatcagtcaccgggtttcttaatgatgtatattccaaagcggcc
gatgaagttggaaaaatacatttaattgcagatgaaagggttcaaggagccgtttttgat
cttccagaggacattggtaaagagttacttgagaaggatgtaccacctggaaacaccatt
tccaaagtcactaagttgcctgctttgcaagatgacgggcctgcaagtgatttctatggg
aagttttccgatagagaacgaagtaaccgcagaggttctagagatgggagaggaggtttt
agatcctcacggggatgggatggaggccgaggccaaggccgaggctctgatgatgatttt
ggtgactcttctaggaggggtggcagaagttataaaagtggcaacagctggtccaaacca
gaaagaagcagccgggatgattggctaattggaggcagacaatcaagcaggtctccgtca
tcaccgaacagaagctttgatggggcctgttttaattgtggggaatccgggcatcgagca
tcggattgtccaaccaagcgaggcggcggcggcttttattaa
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