Trifolium pratense (red clover): 123891119 Help Entry 123891119         CDS       T08949                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism tpra  Trifolium pratense (red clover) Pathway tpra03430   Mismatch repair Brite KEGG Orthology (KO) [BR:tpra00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     123891119  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tpra03400]     123891119 DNA repair and recombination proteins [BR:tpra03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      123891119 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II Tudor_KDM3B PTM_DIR17_Tudor Motif Other DBs NCBI-GeneID:  123891119 NCBI-ProteinID:  XP_045796894 LinkDB All DBs Position LG6:3818550..3826815 Genome browser AA seq 1284 aa AA seqDB search MSRRNSNGRSPLVNPQRQITSFFTKTPSPSPSLTKTNPKSNNPNPIPNPKSNPNPSPTLT TPSPLNPQKPHKPRLVIDASPTTTTPTPPSSSHSHFIGKRIKVYWPLDDAWYEGVVKSFD SVTSKHRIRYDDDEEESIDISKEKIEWLQDNSSKKLKRLRRGSSPIRKMVIEDNEVEESP KEEKEELDDDGDNDDSADEDWGKNAVLEDVADDEEDMELEEENEVVENSNGKSRGKVEPK KRKLGGAAKPEPMKKSKSGKEVNGVVAVKLSPLEVKKISDDLVNAATGDASERFALREAQ KFRFLGKDRRDAKRRRPGDENYDSRTLYLPPDFVRGLSDGQRQWWDFKSKHMDKVLFFKM GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRVLVVEQTETP DQLELRRKENGSKDKVVRREICAVVSKGTITDGEFMSTNPEAAYLMALTEHHENHPNEMS ERIYGVCVVDVSTSRVILGQFNDDSECSALCSILSEVRPVEIVKPAKLLSAETERVLLKH TRNPLVNELIPTVEFWDADKTLDQLKRIYGHNNDVSVQDGELDCLPDVLLELVKTGHDSR SALSALGGALYYLKQAFLDEQLLRFAQFELLPCSVFSGLASKPYMVLDAVALENLEIFEN SRNGESSGTLYAQLNQCVTAFGKRLLKSWLARPLCHVESIKERQEAVACLKGENLPHALE FRNTLSKLPDMERLLARVFSSRDASGRNANKVVLYEDSSKKQLQEFISALRGLELMAQAC LSLGVILNNVKSTQLSQLLTPGKGLPDVSSDLNHFKDAFDWVEANNSGRIVPHEGVDIEY DSACKAVKEIESSLLKHLKEQKKLLGCTSISYVHIGKDTYLLEVPENLSENIPRDYERRS SKKGVCRYWTPDIKIFLKELSHAESEKETLLKSTLQRMIVRFCEHHTQWKQLVSATSELD VLINLAIVSDYYEGPTCRPSFAGTLCTNEAPYIYAKSLGHPVLRSDSLGKAAFVPNDITI GGPDQASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAESFELSPVDRIFVRMGARD NIMAGQSTFLTELSETATMLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHLVHKVQC RGLFSTHYHRLAIDYLKDPKVCLSHMACQVGSGSEGLDEVTFLYRLTAGACPKSYGVNVA RLAGLPTSVLQKAAAKSREFEATYGKYRNALPETNSLNQSWVDEITAIVQKLNNAATNLS REETVSDGSLMELQCKARKLLEQC NT seq 3855 nt NT seq  +upstreamnt  +downstreamnt atgtctcgtcgcaattccaatggtcgatcaccactcgttaatcctcagcgtcaaatcact tcattcttcaccaaaactccttccccttctccctctctcaccaaaaccaatcccaaatca aacaaccctaatcccattcctaaccctaaatctaaccctaaccctagtcctacacttact acaccttcacctctcaatccccaaaaaccacacaagcctcgtctcgtcatcgatgcttct cctaccacaacaacaccaacaccaccatcctcttcgcattctcatttcatcggtaaaagg atcaaggtttattggcctttagacgatgcttggtacgaaggtgttgtcaaatcatttgat agtgttacttccaagcatcggattcgttacgatgacgatgaagaggaatcaatcgatatt tccaaggagaagattgagtggcttcaggataattcttctaagaagcttaaacggctgcgg cgtggttcttcgcctattaggaagatggtgattgaggataatgaggtagaagaaagtccc aaagaggaaaaagaagaacttgatgatgatggtgataatgatgattcggctgatgaagat tgggggaaaaatgctgtattggaggatgttgcggatgatgaagaagatatggagctggag gaagaaaatgaggttgtggagaactctaatggaaagagtaggggcaaggttgagcccaaa aagaggaagctcgggggagcagcgaaaccggaacctatgaaaaagagcaagagtggaaag gaagttaatggggtagtagctgttaagctctcaccattggaggttaaaaagatatctgat gacttagttaatgctgcaactggtgatgcttctgaaagatttgcgctccgtgaagctcaa aagtttcgctttctgggaaaagatcgcagggacgccaaacgaaggcgtccaggagatgaa aattatgactcaagaactctctacttgcctccagattttgtgaggggtttgtcagatggc cagagacaatggtgggacttcaagtcaaaacatatggacaaagttttgtttttcaagatg ggtaaattttatgagctttttgaaatggatgcacatgtaggagcaaaagagcttgacttg cagtatatgaagggagagcaacctcattgtggatttccagagaagaatttctcaatgaat gtagagaaactggctagaaagggttatcgagttcttgttgtagagcaaactgaaacaccc gatcagctggagcttcgtcgcaaggagaacggatctaaagataaggttgtgagacgggaa atatgtgcagtggtttcaaaaggcacaataacagacggggagtttatgtcaacaaatccc gaagctgcatatttaatggcactgactgagcaccatgagaaccatccaaatgaaatgtca gagcgcatctacggtgtttgtgtagttgatgtttccacaagcagagtcattcttgggcag ttcaacgatgactcagagtgcagtgcattgtgctctatcttgtctgaggtcaggccagtt gaaattgtgaaacctgctaaactactgagtgctgaaacagaaagggtactgctgaaacac accagaaaccctctagtgaatgaattaattccaactgtagagttctgggatgctgataaa actttggatcaattgaagagaatttatgggcacaataatgatgttagtgttcaagatgga gagttagattgtctgccagatgttttactggagctggtgaaaacaggtcatgacagcaga agtgcactctcagcacttggtggtgctctctattatttgaaacaggctttcctagatgag cagttgcttagatttgcgcagtttgagttgcttccatgttctgttttcagtggccttgct tcaaaaccatacatggttcttgatgcagtagccctagagaatcttgagatttttgagaac agcagaaatggagagtcttctggcacgctctatgctcaattaaaccaatgtgttacggcg tttgggaagagattgctaaagtcatggcttgcaagaccgttatgtcatgtggagtcaatt aaggaacgccaggaagctgttgcatgtttgaagggagaaaatctacctcacgccctagaa tttcgaaacacattatcgaagttacctgacatggagcggttgcttgcacgggtgttctct tctagggatgctagtggaaggaatgctaataaagtggttctgtatgaggattcatcaaag aaacagctgcaagagtttatttcagccctgcgcggtcttgaactaatggcacaagcttgc ttgtcactcggtgtcattttgaacaatgtcaaatcaacacaacttagtcaacttttaaca cctggtaaaggtcttcctgatgtaagttcggatctgaatcatttcaaggatgcttttgat tgggtagaagccaataactctggccgtatagtacctcatgaaggagttgacatagagtat gattcagcttgtaaggcagttaaagagattgagtccagtttattaaagcacctcaaggaa caaaagaaattacttggatgcacatcaatctcttatgttcatattggaaaggacacatac ctattggaagtgcctgaaaatttatctgagaatattcctcgggattatgagaggcgttca tccaagaaaggcgtctgtaggtattggactccagatattaaaatatttttgaaagagctc tcccatgctgaatctgaaaaggagaccttattgaaaagtacattgcagagaatgattgtg cgtttttgtgagcatcacactcagtggaagcagttggtgtctgcaacttctgagttggat gttttgatcaatttagctattgttagtgattactatgaaggaccaacatgcagaccgagt tttgctgggacattatgtacaaatgaagctccatacatctatgctaaaagtctgggacac ccagttcttaggagtgattccttgggaaaggctgcctttgtacctaatgacataaccata ggtggtccagatcaggcctcctttattcttcttacaggtcctaacatgggtgggaagtca actcttcttcgccaagtttgcttggctgtgattttggctcaggtaggggctgatgttccg gcagaaagttttgaattgtctcccgtggaccgaatttttgttcggatgggtgccagagat aatatcatggctggccaaagtacatttttaactgagctttcagaaactgcaacaatgctg tcatcagcaactcgtaattcattggtggctctggatgagcttgggcgtgggacctcaacg tcggacggacaagccattgcggaatcagtactagaacatcttgtacataaggtgcagtgt cgtggattgttttctacacactatcatcgattagctatagattatctcaaagatcccaag gtctgtctctctcacatggcatgccaagttggtagtggcagtgaaggtttggacgaagtc acctttctttacaggctgactgctggtgcttgccccaagagctatggtgttaatgttgct cgattagctggactaccgacttctgtgcttcagaaggctgctgctaagtccagagaattt gaggccacttacggtaaatacagaaatgcgttacctgaaacaaactctctgaatcaaagt tgggtcgatgagataacagctattgtacaaaaattgaacaatgctgctacaaatttgagt cgggaggagactgtttctgatggttccctaatggagcttcaatgtaaagcaagaaaactt ctagaacaatgttaa

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