Trifolium pratense (red clover): 123891141
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Entry
123891141 CDS
T08949
Name
(RefSeq) cellulose synthase-like protein D5
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00520
Amino sugar and nucleotide sugar metabolism
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
123891141
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tpra01003
]
123891141
Enzymes [BR:
tpra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
123891141
Glycosyltransferases [BR:
tpra01003
]
Polysaccharide
Structural polysaccharide
123891141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_tranf_2_3
Baculo_IE-1
S6OS1
Xin
Motif
Other DBs
NCBI-GeneID:
123891141
NCBI-ProteinID:
XP_045796918
LinkDB
All DBs
Position
LG6:complement(4051533..4056658)
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AA seq
1178 aa
AA seq
DB search
MVNTSSSSPVKITVSSGAKTGGGNRRSIGLTSPIPRPSVSNNNPNPNSPLSNISNRLSSS
GGAIRRLSGGGTGGNYSSMSKDDVTEETTSEYVSYTVHIPPTPDRMPLSSSQTSLPEENT
KINTNKSYISGTIFTGGFNSVTRGHVMECSNDRDDLPLKSKLICAMKGCDEEAIKGCTCE
CGFKICRDCYKEICGNGGGGKCPGCKESYNVNSDGEEEEEEVSECEDQALPLPSMAEFKM
DKRLSVVKSFKAQNHPPDFDHTRWLFETKGTYGYGNAVWPKDGFGSNGYEPPPDFGRKSR
RPLTRKVGVSAAILSPYRLLILLRLAALGMFLTWRVRHRNHEAMWLWGMSVTCELWFAFS
WILDQLPKLCPVNRVTDLSVLKERFESPHLRNPKGRSDLPGIDIFVSTADPEKEPPLVTA
NTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARVWVPFCRKHKIEPRNPEAY
FGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQ
METGADISELLKVPKATWMSDGSHWPGTWSSAEPDHSRGDHAGIIQALLAPPNVEPEYGS
EADGENLIDTTDVDVRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLD
CDHYVYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALD
GLQGPMYVGTGCIFRRTALYGFSPPRASEHHGWFGRRKIKLFLRKPKVSKKEEDEVCVPI
NCDHNDDDADIESLLLPKRFGNSTTLAESIPVAEYQGRLLQDSNGNVTQGRPPGSLTKPR
ETLDAATVAEAISVISCYYEDRTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKR
DAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKFLQRVAYFNVGMYPFTS
MFLIVYCFLPALSLFSGQFIVQSLSVTFLVFLLAITVTLCMLALLEIKWSGITLHDWWRN
EQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGEDEFADLYVVKWSFLMV
PPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGGLFFSFWVLCHLYPFAKGLMGRRGKVP
TIIYVWSGLLSIIISMLWVYINPPAGGRPQDYSQFRFP
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggttaacacatcttcttcttctccggttaaaataaccgtctcctccggcgcaaaaacc
ggaggaggaaatcgaagaagcatcggtctaacaagtccaattccacgtccttctgtttct
aacaacaaccctaaccctaattcccctctcagtaacatttcaaacagactttccagcagc
ggcggcgctattcgaagattatccggtggtggaactggaggtaactattcttccatgtcc
aaagatgatgtaacagaagaaacaacctcagaatatgtttcttacactgttcatattcct
ccaacaccagatcgaatgccgctttcatcttctcaaacaagccttcctgaagaaaatacc
aaaatcaacaccaacaagagctacatctcaggtacaattttcactggaggttttaattca
gttacacgaggacatgttatggaatgttcgaatgatcgtgatgatttaccgttgaaatct
aaattgatctgtgcaatgaaaggctgtgatgaggaagcgatcaagggttgtacatgtgag
tgtggtttcaagatttgtagggattgttacaaagagatttgtggaaatggtggaggtggt
aaatgtcctggttgtaaagaatcttacaatgttaatagtgatggtgaagaggaggaagaa
gaggtttctgagtgtgaagatcaagctttaccgttaccgtcgatggcggaattcaagatg
gataagagactttctgttgtgaagtcttttaaagctcagaatcatccacctgattttgat
catactcgttggttatttgaaactaaaggaacttatggttatggaaatgctgtttggcct
aaagatggttttggttctaatggttatgaaccccctcctgattttggaaggaaaagtaga
agacctttgacaagaaaagttggggtttctgctgcaattctcagtccttataggttgctt
attctgctgcgtctagctgcacttggtatgtttcttacatggagggttcgacaccggaac
catgaggcaatgtggttgtggggaatgtcagtaacttgtgagctatggtttgcattttca
tggattcttgatcagctgccaaagttgtgtcctgtcaacagagttactgatttgtctgtt
ttgaaagaaaggtttgagtcgccgcatctgcggaacccgaaaggaaggtctgatctacct
ggaatagatatctttgtttcaactgcagatccagaaaaggagcctcctcttgtaactgca
aacaccattttgtcaattcttgcagttgattatccagtggaaaaagttgcttgttatttg
tctgatgatggtggagctcttttgacatttgaagctcttgctgagactgctagttttgca
agagtgtgggttcctttctgtagaaaacacaaaattgagccaagaaatcctgaagcatat
ttcggtcagaagcgcgattttctcaagaacaaggttcggttggactttgttagggagaga
agaagggtgaagagagagtatgatgaattcaaagtgaggattaattccttacctgaatct
ataaggagaagatcagatgcttacaatgctcatgaggagttacgagccaagaagaaacag
atggaaaccggtgctgatatatctgaactccttaaggttcctaaagcaacttggatgtct
gatggttctcactggcctggaacttggtcttcagcagaacctgaccactctagaggtgac
catgctggtattattcaggcactgttggctccaccgaatgtagaaccagaatatggttca
gaagctgatggggagaatttgattgacacaacagatgtcgatgttaggttgccaatgctt
gtttatgtatcacgtgagaagagaccaggatatgatcacaacaagaaagcgggcgccatg
aatgctcttgttcgaactagtgccataatgtctaatggaccattcattctcaatcttgac
tgtgatcattatgtctacaactccttggccttaagggaaggtatgtgctttatgcttgac
agaggaggtgaccggatatgttatgttcaattccctcaaaggtttgaaggtattgacccg
agtgatcgatatgcaaatcacaacacagtgttctttgatgtgagcatgagagctcttgat
ggtttacaaggtccaatgtatgttggaactggctgcattttcagaagaacagctctttat
ggttttagtcctcctagagcttctgaacatcatggatggtttggtaggaggaaaattaag
ttgtttctgagaaaaccaaaggtgtcaaaaaaggaagaagatgaagtttgtgtgccaata
aattgcgatcacaacgacgacgatgcagatattgagtccttgcttcttcccaaaaggttt
gggaactctactactctagctgaatccattccagttgcggaataccagggaaggttgctt
caagattcaaatggaaatgtaacacaaggaaggcctcctggttctctcaccaaacctcgt
gaaactttagatgctgccaccgttgccgaggcaatcagtgtcatatcttgttactatgag
gatagaactgagtgggggaaacgagtcgggtggatatatggttcagttacagaagatgtt
gtgaccggttacagaatgcacaatagaggatggagatcagtgtactgtgttaccaaaaga
gatgcttttagaggaacagctccaatcaatttaacagacaggctacaccaggtgcttcgt
tgggcgacagggtcggtcgaaatcttcttctcaaggaacaacgctttattggcaagtcct
agaatgaaatttttgcaaagggtagcatatttcaatgttggaatgtaccctttcacttca
atgtttctgattgtgtattgctttctacctgcattgtccttattctcaggacagtttata
gtccaatctctcagtgtaacctttctagtgttcttgcttgcaatcacagtcacactatgc
atgcttgcactacttgagatcaagtggtcaggtatcactttacatgattggtggagaaat
gaacagttttggttaatcggcggaacaagtgcacatcctgcagctgttttacaaggcttg
ttgaaggtaatagcaggagttgatatctcattcacacttacatcaaagtcagctacacca
gaagatggagaagatgaatttgctgatctttatgtggtgaaatggagctttctaatggtt
ccaccaatcacaatcatgatggtgaatactattgctattgctgttggagtagctaggact
ttatatagtccatttccacaatggagtagactagttggagggttgtttttcagcttctgg
gtgttatgtcatctttacccttttgcaaaaggacttatgggaagaagaggaaaggttcca
accattatctatgtttggtctggattactctcaatcattatttcaatgctttgggtttat
attaaccctcctgctggtggaagaccacaagattactctcaatttcggtttccttag
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integrated database retrieval system
