Trifolium pratense (red clover): 123891272
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Entry
123891272 CDS
T08949
Name
(RefSeq) RNA-binding protein BRN1 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123891272
Spliceosome [BR:
tpra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123891272
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
RBD_DEAH11
RRM_MARF1
GHMP_kinases_C
Motif
Other DBs
NCBI-GeneID:
123891272
NCBI-ProteinID:
XP_045797067
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All DBs
Position
LG6:4789268..4795669
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AA seq
433 aa
AA seq
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MAETKEESKSNEESVKLFVGQVPKHMTEDELLTLFKEFAIVDEVNIIKDKATRASRGCCF
VICPSRDEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEVS
ALFSKYGTIKDLQILRGSQQTSKVGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK
WADTEKERQARRAQKAQSQASNVGHADSQHPSLFGAMPMGYVPPYNGYGYQAPGGFGLMP
YRMPPMQNQPGYHNMMPHMNQGNALRPDLGPNINPRNYHVPPASYVGSYPAVPGLQHPMA
YPGGMISPRPMNSPPGSVSPSGGNGNSATSSGSSRNSGGGQIEGPPGANLFIYHIPQEFG
DQELANAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDSPEAAQSAISMMNGYQLGGKKLK
VQHKRDNKPGKPY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacgaaggaagagagtaaatctaacgaagagagtgtgaaattgttcgtaggt
caagtacctaaacacatgactgaagatgaattacttacattgttcaaagaatttgctata
gttgacgaagtcaacatcatcaaagacaaagctactcgcgcttctcgaggttgttgtttc
gtgatttgtccttctagagatgaagctgataaggccgttaatgcctgtcacaataagaaa
acgttacccggggcatctagtccattgcaagtgaagtatgcagatggcgagttggaaaga
ttagaacacaaactcttcattggcatgcttccaaagaacgtttctgaagttgaagtatct
gcacttttctccaagtatggaactataaaggatttacaaattttaagaggttctcagcag
acaagtaaagtaggttgtgcatttttgaagtacgaaaccaaagaacaagctcttgctgct
ttggaggcaatcaatggaaagcacaaaatggagggttcaagtgttcctttagttgtcaaa
tgggctgatactgaaaaggaaagacaagcccgaagagctcagaaagcacagtctcaagct
tcaaatgtgggacacgctgattctcagcatccttcattgtttggagccatgcctatgggt
tatgttcctccatataatggttatggttatcaggctcctggaggttttgggctcatgccg
taccgcatgccgccaatgcagaatcaacccggttaccacaatatgatgccccacatgaat
caaggaaatgcattgcggcctgatcttggccccaatatcaatcctagaaactatcatgtg
cctcctgcaagttatgttggatcttatcctgctgtgccaggtctacaacatccaatggca
tatcctggaggaatgattagtccaaggcctatgaatagtcctcctggttctgtttcgcct
tctggtggaaatggcaactccgctacatcatcagggtccagcagaaattctggcggtggt
cagattgaaggaccacctggcgcgaatctatttatctatcacatacctcaagaatttgga
gatcaagagcttgctaatgcttttcaaccatttggtagagttttgagtgctaaagttttt
gttgacaaagcaaccggagtcagcaaatgttttggctttgtaagctatgattccccagaa
gctgctcaatctgccattagtatgatgaatggataccaattaggaggtaagaaattaaag
gttcagcataagagggacaacaaacccggtaaaccttactga
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