Trifolium pratense (red clover): 123891435
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Entry
123891435 CDS
T08949
Name
(RefSeq) uncharacterized protein LOC123891435
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123891435
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123891435
Surveillance factors
Other surveillance factors
123891435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
123891435
NCBI-ProteinID:
XP_045797266
LinkDB
All DBs
Position
LG6:complement(30561129..30569563)
Genome browser
AA seq
1663 aa
AA seq
DB search
MAMNDAKMNLPDDLFSSKLSDSHSSLKDEASGGHGEKGIAGLLDVSKEQLSSDSSIPLSP
QWLYSKPVDAKPTANPAGVNSNDPILKDNWRLEGSLDKKDWRKTAPDDINRKWREEEREP
SLPGRRDRRKEDRRVENTSTSENRPLPADRWSDSRGSGHDSRRENKWSSRWGPEEKEKDS
RSEKRNDVEKEDGHTEKQSTGASNRAVSDRDTDSRDKWRPRHRLEAQSAGVATYRAAPGF
GLEKGRTESSIVRFSPGRGRANFNGNLQIGKPPIGSSVGSVLLDNNKTILGKSIGADSYC
YPRGKLLDIYRKQKIDPTFESMPSEVEHTSPITKIDSVEPLAFVAPAAEEEAVLTDIWKG
KITSSEVSGYSGKGKDGGSIDDISGSGALSEGKQPSISSGGNVISGNEILNESDQIFIGS
ASAAGGSLTNAAAEIAKFQEGKQKNVPTMGMHWKDESSGSSIREGIIPRNKVAESEAFAY
HQGQLSAFEEHANQDAIKSMASEISKILPDDSRSLFDFSSLRQSPGINQHDLKINEKIYP
SESVAAPEELSLCYLDPQGMIQGPFLGIDIILWFEQGFFGIDLPVRLSDAPEGSPFLELG
DIMPQLKVNTGLGSDSNMVIQSEPSDAIGRNLKIDVNTFDYNGSSFGDDQPWSSSRPDAT
SSVGIQSQTPNQSYLPEIKFSDEQCFSNIVAHDEGITLSKLAGSSNDNPLMRPLDANAPY
SHHHIGKPVTNEVIGSDTHNSEADKLHPFGLLMSELRDGSHLRRAQSSNSSLRLGDQGHF
TDPLIDRDGPFSDQSSMGGMVNQSSFRDTWTDEYGINRPLNPNQRVGSLEDQFLSRMGPN
FNNFEVADHLILQKLQKEQQQQQAERLRQQQAERLQQQQAERLQQQQAERLQQQQQAERL
QQQQVERLQQQANISNHFPAHLNGTDLDRFPGFSPSHSNNSGIQQMMQNPGSDFERLFEL
QAQRQLEIQQQQDMHHQQLLHQQLKLQPQQQSQVQQLLLEQLMHQQISDPNFGQSKHDPT
RDNLLDQVQLRRYLHDLQQNSHSLGHLDPSMEQFIQANIGLNAAQGRQADLSELLLQARH
GNILPSEQQLRFQDQFQAQQLSLALRQQLGLDGERHFGRSWPINETGQLVRNPSNHQLGH
SAGFNVSEIHKQQQRLVAQEEQLNFLGRNHLEQNQRGFYDPSSMMFERSSPVSVQGRELL
ERRRYMHPTDQLGALSSHHNLQSSDDLFGHHSLSGNNGHVDNNWVDPRVQLQHLEAMRQR
RELGDNITSADLNISASAGGHEDSSGRGFVDLLHQKLGLQSAQSSTVDKWHHPLSSRSHD
KSWHVPEASTLIHPFELPPDQQAHLNDPFLERAQSANSNALMHDHLSNMHMNEHYNNLGN
TERVPLRSRSGSLLEDQSLLSTNKDALHPNYRIPFQIGKSSMEKDMLELDTNKGHRHDFM
GTMSKFVPGMSDLSEQVESTMPSMEMPIAHSRHSSLSSAGGDGGSFGREMGLNSSRGDEV
SIDRIPPSTKGFDNAFHKRPHVSRVLSSPDVQSDQPSVPPANQNHLLNITSNEGRREPSG
NLSTTNMADAQAAGKKEARFRSSSFSEGAMSEASFIDMLKKPVLPEADAHPISGAGAEST
DGGQAGRGGKKKGKKGKQIDPSLLGFKVSSNRIMMGEIQRPDD
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaacgacgcaaaaatgaatctccccgacgatctcttctcttccaaactttcc
gattcgcactcttctctcaaagatgaagcgtcaggaggacacggggagaaaggcattgca
ggactactcgatgtttcgaaagagcaattgtcatctgacagcagcataccgttatcacca
cagtggctttattccaaacctgttgatgcaaagccaactgccaacccagcaggggtgaat
tccaatgatcctatactgaaggataattggcgtttggaggggtccttggacaagaaagat
tggagaaagactgctcctgatgacatcaatcgtaagtggcgtgaagaggagagagaacca
agtttacctgggagaagggatcgtagaaaagaagatcgtcgtgtggagaacacttcaacc
tccgagaatagacccttgcctgctgatcgctggagtgatagccggggttctggccatgac
tctcgaagagagaataagtggtcatcaagatggggtcctgaagaaaaagagaaggattct
cgaagtgagaaaaggaatgatgtggagaaggaagatggccacacagaaaaacaatctact
ggtgctagcaaccgtgcagtttccgaccgtgacactgattctcgtgataaatggaggcca
cggcatcgcttggaagctcaatcagctggtgtggctacataccgtgccgcacctggattt
gggctggagaaaggacgtacagagagctccatcgtgcgattctcacctggaagaggaagg
gcaaatttcaatggaaacctacaaattggaaagcctcccataggctctagtgttggatct
gtacttttggataataataaaactatactggggaagtctattggtgctgattcatattgc
tacccaaggggtaagcttcttgacatatatcggaagcaaaagatagatccaacttttgag
agtatgccatctgaggtggagcatacatcaccaataactaaaattgattctgtagaacca
ttagcatttgttgctcctgcagctgaggaggaggctgtccttacagatatatggaaggga
aaaattactagcagtgaagtctcaggctactccggtaaaggaaaggatggagggtcaatt
gatgatatttctggttctggtgctttaagtgaaggaaaacaaccttcaatcagcagtgga
ggaaatgtcatatcaggaaacgaaatcttaaatgaatctgatcaaatttttattggatca
gcatcagctgctggtggttcattgacaaatgcagctgcagaaattgcaaaatttcaagag
ggcaagcagaaaaatgtgccaactatgggaatgcattggaaagatgagagctctggtagt
agtattagggagggaatcattcctagaaacaaggttgctgaatcagaagcttttgcttac
catcagggacaactttctgcttttgaggaacatgctaatcaggatgcgatcaagtcaatg
gcttcagaaattagtaaaatcctacctgatgattcccgctctctctttgatttttcatct
ctgcgacaaagtccaggcattaatcaacatgacttgaaaattaatgagaagatatatcca
tctgaaagtgtcgctgctcctgaggagttgagtttgtgctatctggaccctcaagggatg
attcaaggaccctttcttgggattgacatcattttgtggtttgaacaagggttttttggg
attgacttgcctgttcgattgtctgatgccccagaaggatctccatttctagagcttggt
gacattatgcctcaactgaaagtcaacacagggttaggttctgatagtaacatggttatt
cagtcagaaccatccgatgccattggaaggaacctaaaaattgatgtaaatacatttgac
tataatgggtcttcttttggtgatgatcaaccatggtcttcatcccgtcctgatgctaca
tccagtgttggtattcagtctcaaacaccgaatcaaagttatctcccagaaatcaagttc
tctgatgagcagtgcttcagcaatattgttgcacatgacgagggtatcacattatcgaaa
ttggcgggaagcagcaatgacaaccctttgatgaggcctctggatgccaatgctccatat
tcccatcatcatattggaaaacctgtcacaaatgaagttatagggagtgatactcataat
agtgaggcagataagttgcatccctttggtttattgatgtctgaactcagagatggctct
catttaaggcgcgcacaatcctccaatagttctttgagattgggtgaccagggtcatttt
actgatccattaattgatagagatggtccttttagtgatcaaagctctatgggtggcatg
gttaatcagtcttctttcagggatacttggactgatgaatatgggataaataggcctctt
aatcctaatcagcgtgttggttcattagaagatcagttcttgtctcggatgggaccaaac
ttcaataattttgaggtggcagaccatcttattttgcaaaagctgcagaaggaacaacaa
cagcagcaggccgaacggcttcggcagcaacaggcggaacgacttcagcagcaacaggcg
gaacgacttcaacagcagcaagcggaacgacttcagcagcagcagcaggcagagcgactt
cagcagcagcaggtggaacgacttcagcagcaggctaatatatctaatcatttccctgca
catcttaatgggacggatttagatagatttcctggtttctctccatctcatagcaataac
tctggcatccagcaaatgatgcagaatcctgggtcagattttgaacgtcttttcgaactg
caagctcaacgccagcttgagattcaacaacagcaagatatgcaccatcaacaactactt
caccaacaattgaaactacagccccaacaacagtctcaagttcaacagttgcttcttgaa
caattaatgcatcagcagatatctgatccgaattttggacaatcaaaacatgaccctact
agggataacttgttagatcaggtacaattgaggagatatctacatgacttgcagcagaat
tcacattctttaggacaccttgatccatcgatggaacagtttatccaagcaaatattggc
ctcaatgctgcgcaaggaaggcaagctgatttgtcagagctcttgttgcaagcaaggcat
ggtaatatattgccatcggaacaacagcttcgttttcaagatcagtttcaagctcagcaa
ttgtcattggctcttagacagcagttagggttggatggggaaaggcattttggcaggtcg
tggccaatcaatgaaaccggacagttagtaagaaatccatcaaaccaccaattgggtcat
tcagctggatttaatgtttcagaaatccacaaacaacagcagaggcttgttgcacaagag
gagcaattaaatttcctggggaggaatcatcttgagcagaaccaaagagggttctatgat
cctagttctatgatgtttgagaggtcatcacctgtttctgtgcaaggaagggaattacta
gaacgccgtcgctacatgcacccaactgatcaactaggtgctttgtcttcccaccacaac
ctgcaatcatctgatgatctttttggtcaccactccctctctgggaacaatgggcatgtg
gataataactgggttgatccacgggtccagctacaacatcttgaagctatgaggcagaga
agagagttaggggataatattacatcggcagatcttaacatatctgcatctgctggaggt
catgaagatagttcaggacgaggttttgtggaccttcttcatcagaaactgggtcttcaa
tctgcacagtcatcaactgttgataagtggcatcatcccctctcgtcaagaagtcatgat
aaatcttggcatgttcctgaggctagtacattaattcatccttttgagcttcctccggat
cagcaagcccatctgaatgatccgtttctagagagggctcaaagtgcaaattccaatgct
ctaatgcatgatcatttaagcaacatgcatatgaatgagcattacaacaatctagggaat
actgaaagagtgcctcttcggtcaagatctggttcactacttgaagaccaatcactgtta
tctacgaataaggatgctctgcatcccaattacagaattccttttcagattggcaaatca
tctatggaaaaagacatgcttgagttggataccaataagggacacaggcatgattttatg
ggcacaatgagcaagtttgttcctgggatgtcagacttgtcagaacaagtggaaagcacc
atgccttcaatggaaatgcctattgcccacagtagacatagctcactaagcagtgctggt
ggtgatggtggctcttttggtcgtgagatgggtttgaatagttcacgaggggatgaggtg
tctattgacaggattcctccttcaacaaaagggtttgataatgctttccataagcgccct
cacgtatctcgggttttgtcctccccagatgttcagtcagaccaaccatctgtacctcct
gccaatcagaaccatttattaaacatcacatccaatgaagggaggagagaaccgtctgga
aatttgtcaactacaaacatggctgatgctcaagcagctgggaagaaggaggctcggttt
agatcttcatccttcagtgaaggtgctatgtcagaagcatcatttatagatatgctcaaa
aagcccgttctccctgaagcggatgcacatccaatcagtggagctggggcagaatcaacc
gatggtggtcaagcagggcgaggtggcaaaaagaaaggaaagaaagggaaacagatagat
ccttctcttctgggtttcaaggtctcgagtaaccggatcatgatgggtgagattcaacgc
cctgatgattaa
DBGET
integrated database retrieval system
