Trifolium pratense (red clover): 123891505
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Entry
123891505 CDS
T08949
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123891505
Spliceosome [BR:
tpra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123891505
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_3
PPR_1
ARM_TT21_N
Suf
Motif
Other DBs
NCBI-GeneID:
123891505
NCBI-ProteinID:
XP_045797339
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Position
LG6:31125115..31129641
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AA seq
772 aa
AA seq
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MQGLTTAAASPGPVRYFFRFRFHSSSSSMRSTFTLFRNLTLSTLHSQRTLPFRLLPTRLI
AAAADQRVPHEDLIFHFAVEPEADDKRLPRPDVEVMELSQVPELWRRSRVAWLCKELPAH
KAGTLVRILNAQRKWLRQEEATYIIMHCLTIREIETAFRVYKWMMQQSWYWFDFALATRL
ADYMGKEGKFAKCREVFDDIINQGRVPSESTFHMLVVAYVSSPIQGCLDEACGIFHRMIQ
LGGYQPCLSLHNSLFKALVNKQGNFSKQYFKQAEFIYHRMVTTGFNVHKDIYGGLIWLHS
YQDSIDKERIQALREDMLHAGIDESKEVLVSILRACARVGEVDEADKTWSKLLQFESNPP
SQAFVYKMEVYSKVGMPMKSLEVFREMQLKLGNTSVAAYNKIIEILCKAQASEFAESVMT
DFVNSGLKPLTPSYVYLLNMYFNLESHDKLEEVFLQCLEKCRPNTAIYNIYLDSLVKVGK
LDKAEDIFSQMFRDASIGVNARSCNIILHGYLYSGNNLKAEKIYDLMCQKKYEIDAPLME
KLDFILSLRRKIIKKPTSLKLSKEQREILIGMLLGGLQIDSDDQRKNHIIRFDFDGNSES
HYVMKSHIHRQFYDWLHPTFKPSDDSENVPDKFCTIASSHFGFYADQFWSKGHPTTPKLI
HRWLSPCVLAYWYMYAGHRNSSGDVLLKIKGNREGVESIVKKFKAMSIDCKVKGTGKVFW
IGIMGSNTTWFWKLVEPYILEDARDFTKADVNIMGQDLMETQDINFNSESDE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcagggattaacaactgcagcagctagtccaggtccggttaggtacttcttccgcttc
cggtttcattcttcttcttcttcaatgcgttcaacattcacactttttcgcaatctcact
ctctccactctccactcacaacgcacgcttcctttccgacttctccctacccgcctcata
gctgcggccgccgaccagcgtgttccccatgaagaccttattttccattttgcggtggag
ccggaggctgatgataagcggctgccccgtcctgatgtggaggtgatggagttgagtcag
gtgccggaactctggcggagatctagagttgcctggctctgcaaagagcttcccgcgcac
aaggcaggaactctggttaggattcttaatgcgcagaggaagtggctcaggcaggaagaa
gccacctatatcattatgcattgcttgaccattcgcgaaatcgagactgcatttagggta
tacaaatggatgatgcaacagagttggtattggtttgattttgctcttgctactaggctg
gctgattacatgggtaaagagggtaagtttgcaaagtgccgtgaggtttttgatgatatt
atcaatcaaggtcgtgttcccagcgaatcaacattccatatgttggttgtggcttacgta
agttctcctattcaaggttgtttggatgaagcgtgtggtattttccaccgaatgattcag
ttgggtggataccagccctgtcttagcttacataattctcttttcaaagctcttgtaaac
aaacaagggaatttttcaaagcagtattttaagcaagctgagtttatatatcaccgtatg
gttacaactggatttaatgtacataaagatatttatggtggcctaatttggctgcatagc
tatcaggattctatagacaaagaaagaatacaagcattgagggaagatatgcttcatgct
ggaattgatgagagtaaagaggtgctagtatcgatcttgagggcttgtgcaagggtgggg
gaggtggacgaagcagacaaaacttggtccaaacttttgcagtttgaaagcaaccctcca
tcacaagcttttgtgtacaaaatggaagtctactctaaggttggtatgcctatgaagtcg
ttggaggtatttagggaaatgcagttgaaactaggtaacacaagtgttgcagcatataat
aaaataatagaaatactgtgcaaagcacaagcatccgaatttgcagaatcagtcatgaca
gattttgtcaatagtggtctgaagccccttacaccatcatatgtttatttactaaacatg
tacttcaacttggaatcacatgataaattggaagaggtgttcttgcaatgcctggagaaa
tgtcgtcctaatactgcaatatacaatatatatttggattcgttggtgaaagttggtaaa
cttgacaaggctgaggatatctttagccaaatgttccgtgatgcaagtattggtgtcaat
gcccggtcatgtaacatcatcttacatggatacctatattcaggaaataacttaaaggcc
gagaagatctacgacttaatgtgccaaaagaagtatgaaattgatgccccattaatggaa
aagcttgactttatcctgagtttgagaaggaaaattattaaaaagccaacgagcctgaag
ctaagcaaagaacagagagaaatactgattgggatgcttttaggtggtttgcagattgat
tctgatgaccaaaggaagaaccacattatccgtttcgattttgatggcaattctgagagc
cattatgtcatgaagagtcatatacatcgtcagttttatgactggctgcatcctactttt
aagccaagcgatgacagtgagaacgtaccagataagttttgcaccattgcaagctctcat
tttggattttatgccgatcagttttggtcaaaaggtcatcctacaactccaaaacttatt
cataggtggttgtcaccgtgtgttcttgcatactggtacatgtatgcgggccatcgaaat
tcatcgggggatgttttactaaagattaaaggaaatcgtgagggagtggagagcattgtc
aaaaagttcaaagccatgtccattgattgtaaagtcaagggaacgggaaaggtattctgg
attggtattatgggaagcaatacgacttggttctggaaattggttgagccatatattcta
gaagatgcaagagatttcactaaggctgacgtcaatattatggggcaggatttaatggaa
actcaagacattaacttcaatagtgaatcagatgaatga
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