Trifolium pratense (red clover): 123891523
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Entry
123891523 CDS
T08949
Name
(RefSeq) ABC transporter B family member 20-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123891523
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123891523
04147 Exosome [BR:
tpra04147
]
123891523
04090 CD molecules [BR:
tpra04090
]
123891523
Enzymes [BR:
tpra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
123891523
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
123891523
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123891523
CD molecules [BR:
tpra04090
]
Proteins
123891523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
Zeta_toxin
AAA_23
AAA_16
RsgA_GTPase
HupE_UreJ
DUF87
Motif
Other DBs
NCBI-GeneID:
123891523
NCBI-ProteinID:
XP_045797357
LinkDB
All DBs
Position
LG6:complement(31272506..31282376)
Genome browser
AA seq
1403 aa
AA seq
DB search
MMISRGLFGWSPPHVQPLTPVSEVSEPPESPSPYVDPGADTSTSQQVEVEEEMEEQEEME
PAPAAVPFSKLFACADRFDWFLMAVGSVAAAAHGTALVVYLHYFAKIIHIMRMDDQPYTS
QERFDRFTELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFD
TYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLINCWQIALITLATGP
FIVAAGGVSNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYATSLQA
TLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIVTALFAVILSGL
GLNQAATNFYSFEQGRIAAYRLYEMISRSSSSVNDDGTSLDSVQGNIEFRNVYFSYLSRP
EIPILSGFYLTVPSKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLNLEW
LRSQIGLVTQEPALLSLSIRDNIAYGRDVTMDQIEEAAKIAHAHTFISSLKKGYDTQVGR
AGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAEKAVHEALDMLMLGRSTIIIA
RRLSLIRNADYIAVMEEGQLVEMGTHDELLNLNGLYAELLRGEEAAKLPKRMPTRNYKET
AAFQIENDSSVSHNLNEPSSPKMMKSPSLQRISNVSHSRRPSDIIYNFQESLSPSSENVL
ENGQAPDADDKEPSIRRQDSFEMRLPELPKIDIQSVPRQKSNGSDPESPISPFLTSDPKK
ERSHSQTFSRPHSHSDDASVTTREKREAQKRKPPSLQKLIELSFAEWLYALLGSIGAAAF
GSFNPLLAYVVGLVVAAYYRIDDQHHLAQEVDKWCLIIGCMGIVTVIANFLQHFYFGIMG
EKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSA
AVIVGLLIGAVLHWRLALVAFATLPILCISAVAQKLWLNGFSRGIQEMHRKASLVLEDAV
RNIYTVVAFCAGNKVMELYRMQLKKIFKKSFLHGMAIGFAFGFSQFLLFACNALLLWYTA
VCIKNGYINPSTALREYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIIDREPKIDPD
NNTALKPPNVYGTIELKHVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIIS
LIERFYDPVAGQILLDGRDLKLYNLRWLRSHLGLIQQEPIIFSSTIRENIIYARHNASEA
EMKEAARIANAHHFISSLPHGYDTHIGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEAS
SSVESESSRVIQEALDTLIMGNKTTVLIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLVA
KNGLYVRLMQPHFGKAIRQNRLV
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgatgatttcgagaggtttgttcgggtggtccccaccgcacgtacaaccgctcacaccg
gtttcggaggtatcggagccaccggaatctccgtcaccatatgtagaccccggagctgat
acctccacgtcgcaacaggtggaagttgaagaggaaatggaggaacaagaggaaatggaa
ccggcgccagctgcggtacctttctcgaagctttttgcgtgtgctgatcggtttgattgg
tttctcatggcggttggttctgttgctgctgcggctcatggaaccgctcttgtagtttac
ttgcattactttgctaagattattcatattatgcggatggatgatcagccgtatacgtcg
caggagcggtttgataggttcactgagcttgctttaaccattgtttacattgcagcggga
gtttttgctgctggttggattgaggtttcatgttggattttgactggagaacgacaaact
gctgtcatcaggtccaaatatgtccaagtattactaaatcaggatatgagttttttcgat
acttacgggaataatggagacattgtgagtcaagtattgagtgatgtgctgcttatccag
tctgctcttagtgaaaaagttggaaattatattcataatatggctacattcttcagtggt
cttgtcattggccttatcaattgttggcagattgctttgataacattagcaacaggtcct
tttattgttgccgcaggaggagtatcaaatatattcctccatagacttgcagagaatatc
caagatgcatatgctgaagcagctagcattgctgaacaggcagtttcctatgtaaggaca
ttatatgcatttacaaatgaaacgttggccaagtactcatatgcaacatcactgcaagct
actcttagatatggaatattaataagtcttgttcaagggctaggtcttggattcacgtat
ggacttgcaatatgttcttgtgcattacaactctgggttggaagatttttggttattcac
ggaaaagcgcatggcggtgaaatagtaacggctctttttgctgtaattctaagtggcctg
ggattgaatcaagcagcaacaaatttctactcctttgaacaagggcggatagctgcttat
agattatatgagatgataagccggtcatcctcatctgttaatgatgatggcacttccctt
gactctgtgcaaggaaatatagagtttcggaatgtttatttcagctatctgtctcgtccc
gaaatccctatcttgagtggattttatctcactgtaccttctaagaaagctgtagcactt
gttggcagaaatggctctggaaaaagtagtattattccactcatggagcgtttttatgat
cctacgttaggagaagttcttttagatggtgaaaacatcaagaatttgaatttggaatgg
ctgaggagccagataggactagttacccaggagcctgctttgctcagtttgagtataaga
gataacattgcttatgggagggatgtcaccatggatcaaattgaagaggctgctaaaata
gctcacgcacatacatttatcagctcattgaagaaaggttatgacacacaggttggcagg
gcaggtttagctttgaccgaagagcagaaaataaaactttctattgcaagagctgtgctt
ctaaatccatcaattcttctgcttgatgaagtaactggtggacttgattttgaggctgag
aaggctgttcatgaggctctggatatgcttatgttgggacgctcaacaataataattgct
cgaaggcttagtctcataagaaatgctgattatatagctgttatggaggagggtcaactc
gttgaaatgggtactcatgatgaattgttgaacctgaatggcttatatgcagagcttcta
cgaggtgaagaggcagcaaaacttcccaagcggatgcctactcgaaactacaaggagact
gcagcatttcaaattgagaatgattcttcagtgagccataacttgaatgaaccatcatcc
cccaaaatgatgaagtcaccctctcttcaaagaatttctaatgtatcacattcgcgacga
ccttcagatatcatctataactttcaagaatcgttgagtccatcatccgagaatgtgctg
gaaaatggtcaagctccggatgcagatgataaggagccatccataagaaggcaggatagt
tttgaaatgagactgccagagttacccaagattgatatacagtctgtgcctcggcaaaaa
tcaaatggttctgacccagaatcccccatttcaccatttttaacatctgatcctaagaaa
gaacgttcccattcacaaacttttagtagaccacatagtcattctgatgatgcttcagtt
acaacgagagaaaaaagggaagcacagaagcggaaaccaccatcacttcagaagttgatc
gagcttagttttgccgagtggctttatgctctgttaggaagcattggcgctgctgccttt
ggttcattcaatccccttctagcttatgttgttggccttgtggtggcagcttactataga
attgatgatcaacatcacttagcacaggaggtagacaagtggtgcttgatcattggctgc
atgggtattgtaacagttattgccaactttttgcagcatttctattttggtattatggga
gagaaaatgacagaaagagttaggagaatgatgttctcagccatgctaaggaatgaagta
ggatggtttgatgatgaggaaaacagtgctgacaatttatccatgagattggccaatgat
gctacttttgtcagagctgcttttagcaatcgactttccatatttatacaggacagtgct
gcagttatcgttggccttctcattggtgctgtgctgcactggcggttagcactggtggct
tttgcaacccttccaattctctgtatttctgcagttgcccagaaattgtggctaaatgga
ttttcaaggggcatacaggaaatgcacagaaaagcatctttggttctcgaagacgcagtt
agaaatatatacactgttgttgcattttgtgctggcaataaggtaatggagctctatagg
atgcaattaaaaaaaatatttaagaagagctttcttcatgggatggcgattggttttgca
ttcggcttttcacagtttctactttttgcctgtaatgcccttctactttggtacaccgcg
gtatgtattaaaaatggttacataaatccatccaccgcactgagggagtacatggttttc
tcatttgccacatttgccctagtggagccttttggattggctccttacatacttaaacgg
agaaaatcccttatatcagtgtttgacattatagaccgtgagcctaaaattgatcctgat
aacaacacagcgttgaagccacccaacgtatatggaaccattgagttaaaacatgttgat
ttttgttatccgtctcgtcctgaagtgttggtattgagcaattttagtctcaaagtgaat
gggggtcaaacagttgctgttgttggagtttcagggtcaggaaagagcactataatatct
ttgatcgagagattttatgatccagttgcggggcaaattttactcgatggaagggattta
aagctctataacttgagatggttaaggagccacctcggtttaattcaacaggaacctatt
atcttctcatcaaccataagggaaaacattatatatgcaaggcataatgctagtgaagct
gagatgaaagaggcagcgagaatagcaaatgctcatcattttattagcagcttgcctcat
ggttatgacactcatattgggatgagaggtgttgacttaaccccaggacagaaacagaga
attgcaattgcaagggtagtgctgaaaaatgcacctatcttgttgttggatgaagcaagt
tcatcagttgaatccgagtcaagccgagtgatacaagaagctctagacacactaataatg
ggaaacaagaccactgttttaatagcgcatagagctgcaatgatgagacacgtggacaat
attgtagtgcttaatggaggacgaatagtggaagagggaagtcatgattcgttggtggca
aagaatggtctgtatgtccgattgatgcaacctcattttggtaaggctatacgtcagaat
cggcttgtttag
DBGET
integrated database retrieval system
