Trifolium pratense (red clover): 123891527
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Entry
123891527 CDS
T08949
Name
(RefSeq) beta-hexosaminidase 1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00511
Other glycan degradation
tpra00513
Various types of N-glycan biosynthesis
tpra00520
Amino sugar and nucleotide sugar metabolism
tpra00531
Glycosaminoglycan degradation
tpra00600
Sphingolipid metabolism
tpra00603
Glycosphingolipid biosynthesis - globo and isoglobo series
tpra00604
Glycosphingolipid biosynthesis - ganglio series
tpra01100
Metabolic pathways
tpra04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
123891527
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
123891527
00513 Various types of N-glycan biosynthesis
123891527
00531 Glycosaminoglycan degradation
123891527
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
123891527
00604 Glycosphingolipid biosynthesis - ganglio series
123891527
00511 Other glycan degradation
123891527
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
123891527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tpra03110
]
123891527
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
123891527
Chaperones and folding catalysts [BR:
tpra03110
]
Intramolecular chaperones
Others
123891527
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Motif
Other DBs
NCBI-GeneID:
123891527
NCBI-ProteinID:
XP_045797364
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Position
LG6:complement(31318237..31324751)
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AA seq
567 aa
AA seq
DB search
MITMFQSKPRTLFSPILSLFFLFFFLLITFASKIKHHDNNLHNHDESLTYLWPLPSQFTS
GNHSLSVDPSLTVSVIGNGGVADFPTLNFAFDRYKEIIFKHTGYGFGKGLVRKLRERIGV
GVVSSYNIVILNIIVHSNIEELKLGVDESYTLKISTANESSVAGDATIEANTVFGALRGL
ETFSQLCSFDYTTKTVKINNAPWSIQDKPRFAYRGLMLDTSRHYLPINVIKQVIESMSYA
KLNVLHWHIIDEQSFPLEIPTYPNLWKGSYTKWERYTVEEAYEIVNFAKLRGINVMAEID
VPGHAESWGAGYPDLWPSPSCREPLDVSKNYTFDVISGILSDMRKIFPFELFHLGGDEVN
TDCWRNTPHVKEWLQKHNMTTKDAYEYFVLKAQEIALSKNWSPVNWEETFNTFPSKLHPE
TIVHNWLGPGVCPKAVAKGFRCIFSNQGVWYLDHLDVPWDEVYTAEPLEGIEKDEEKKLV
LGGEVCMWGETADASDVQQTIWPRAAAAAERLWSPIDSTSAQNVTLTALPRLQHFRCLLN
GRGVPAAPVTNYYGRRAPDGPGSCYDQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgattactatgtttcaatccaaacccagaaccctcttttcaccaattttgtcacttttt
ttcttattcttcttcttgttaattacctttgcttctaaaatcaaacatcatgataataat
cttcacaatcatgatgaatcactcacatatctatggccactcccttcacaattcacttca
ggaaatcactctctctccgttgacccttcactcactgtttcagtcattggaaatggtggt
gttgctgattttccaactcttaatttcgcttttgatagatataaagagatcatttttaag
catactggttatggatttggtaaagggttggttagaaagttaagagaaaggattggtgtt
ggtgttgtttcttcttataatattgttattttgaatatcattgtacattcaaatattgag
gagcttaaacttggcgtggatgaaagctataccttaaaaatttctacagccaatgagtct
tctgttgctggggatgctaccattgaggcaaatactgtttttggtgcattgcgtggatta
gagacattcagccagctttgttcttttgattatacaactaaaacagtaaaaataaacaat
gcaccttggtccatccaagataaacctagatttgcataccgcggtcttatgttagataca
tcgaggcactacttaccaatcaatgtaattaagcaagttattgaatctatgtcctatgcc
aaacttaatgttctacattggcacatcatagacgaacagtcgtttcctctcgagatacct
acatatccaaatttatggaaaggttcatatacaaagtgggagcgttacacagtagaggag
gcatatgaaattgtgaactttgccaaactgagaggcataaatgtgatggcagaaatagac
gttcctgggcatgcagagtcatggggtgctgggtatcctgacctttggccatcaccttcc
tgccgggagccactagatgtttcaaagaattatacttttgatgtcatttccggtattctg
tcagatatgagaaagattttcccgtttgagctatttcacctgggtggtgatgaagttaat
acagattgctggagaaatactcctcatgtaaaggaatggcttcagaaacacaacatgact
actaaagatgcctatgaatactttgtactgaaggctcaagagatagccctttcaaaaaat
tggagtccagtgaactgggaagaaaccttcaacacatttccatcaaagcttcatcctgaa
acaatagtgcataactggttgggccctggtgtttgtccaaaggctgttgcaaagggtttc
agatgcattttcagtaaccaaggtgtctggtatcttgaccatctcgatgtgccttgggat
gaggtctatactgccgagccactagaaggtatagagaaagatgaagaaaaaaagcttgta
cttggaggagaagtttgtatgtggggtgagacagctgatgcatctgatgttcagcaaaca
atttggcctcgagctgccgcagctgcagaacgcttgtggagtccgatagattccacttct
gcacaaaatgttaccttaacggcattgccgcggcttcaacacttcagatgtctattaaat
ggacgaggggttccggctgctcctgtgacaaactattatggtagaagggcacctgatggt
ccaggctcatgctatgaccaataa
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