KEGG   Trifolium pratense (red clover): 123891591
Entry
123891591         CDS       T08949                                 
Name
(RefSeq) U6 snRNA phosphodiesterase isoform X1
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
tpra  Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpra03041]
    123891591
Spliceosome [BR:tpra03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    123891591
SSDB
Motif
Pfam: HVSL 2_5_RNA_ligase2 prok_STING LigD_Prim-Pol
Other DBs
NCBI-GeneID: 123891591
NCBI-ProteinID: XP_045797435
LinkDB
Position
LG6:28332504..28338945
AA seq 320 aa
MDALIACYGDESSDSDSESSPSNPTLAYSEGPPSLPPRATKVREPLPEVCVQPLPPPPIA
LLHPPNFLGPQDLQISQTTKVRSFPHVDGNYALHVYIPINISSPSKKELAAFLKKISSRE
PSLHVVDVDVPLNILCKNDEKLEQVALGREFHISLGRTVPLRVHQIDSVVTMLKQKLQTQ
NQCYWIDFSKWEVFVNDDRTRTFLSLEVVHGGLVEIRKQIEAVNAIYKLHNLPEFYEDPR
PHISLAWSLGDTSDSLKKVVNEEVKKCVAGKSLKKCIFTCKFEGIECKIGNKAYTICKIS
DKLLSKKKRKKIDDNVYSLE
NT seq 963 nt   +upstreamnt  +downstreamnt
atggatgcattaatagcatgttatggggatgaatcttctgattcagattctgaatcttcc
ccttcaaatccaaccttagcttactcagaagggcctccgtccttgccaccccgggcaaca
aaagttcgtgaaccacttccagaagtatgtgtccagcccttgccaccacctcctattgca
ctccttcatcctccaaattttcttgggcctcaagatctgcagataagtcagacaactaaa
gttaggagcttccctcatgttgacggcaactatgccttacatgtatacataccaattaat
atctcatctccatcgaaaaaagaactagctgctttcttgaaaaaaatctcatctcgggaa
ccgagtcttcacgttgttgatgttgatgtcccacttaacatcctctgcaaaaatgacgag
aagctcgaacaagttgcattaggaagagagtttcacataagtttgggaagaactgttcca
ttacgagtacatcagattgactcagtggtcacaatgctaaaacagaaacttcaaactcaa
aaccaatgttattggatcgactttagcaaatgggaagtttttgtcaatgatgatcgcacg
cgcaccttcctttcactcgaagttgttcatggtgggcttgtagagataaggaagcaaatt
gaagcagtcaatgcaatttacaagcttcataatcttcctgaattttacgaggatccacgt
ccacatatatcgttagcatggtcactgggcgacaccagcgattccctgaagaaagttgtg
aatgaggaagtgaagaaatgtgttgctgggaaatccttgaagaagtgtatttttacatgt
aagttcgaaggcattgaatgtaagattggtaataaagcatacacaatatgtaaaatttca
gataaattattgtcaaaaaagaaaagaaaaaagatagatgataatgtgtatagtttagag
taa

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