Trifolium pratense (red clover): 123891732
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Entry
123891732 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123891732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123891732
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123891732
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123891732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
123891732
NCBI-ProteinID:
XP_045797586
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All DBs
Position
LG6:complement(11638965..11639573)
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AA seq
202 aa
AA seq
DB search
MSSIQCTNGHIICASCKPKCMKVACDNEPYGCKEVVKHTQRHAHIKSCVFSPCLCPETDC
NFRANTTVLGEHFRTNHQLRVPPFTYDEVFSAFIHIKDDVTIFQAMNDGQLFVITCKTHY
IVKKLNLYHIGPNKSKPRYSFEMLVLCQDRVLQLKSEAVNVEDRAYPPSGALYVRYDYFK
DGRLSMKIRINKNDDAESGTDL
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaattcagtgtaccaatggccacattatttgtgcctcttgcaaaccaaaatgt
atgaaagtagcatgtgacaatgaaccatatggttgtaaggaggtggtaaagcatactcaa
agacatgcacacattaagtcatgtgttttttctccatgcctatgtcctgaaacagattgc
aactttcgcgccaatactacggtgttaggagagcactttaggacaaatcatcaacttcgt
gtaccaccatttacatacgatgaagttttctccgccttcatacacattaaagacgatgtc
actatttttcaagcgatgaatgacggacaactatttgttattacttgtaagactcactat
attgtgaagaagctgaatctttaccatattggacccaataagtccaagccaaggtatagt
tttgaaatgttagttttgtgtcaagatcgtgttctacaactaaaatctgaagctgtgaat
gtcgaggaccgcgcatatccgccatcaggtgcactttatgttagatatgattacttcaaa
gatggacgactctctatgaaaattcgaataaataagaatgatgatgcggagtctggaacc
gatctatag
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