KEGG   Trifolium pratense (red clover): 123891783
Entry
123891783         CDS       T08949                                 
Name
(RefSeq) uncharacterized protein LOC123891783
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123891783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123891783
   03041 Spliceosome [BR:tpra03041]
    123891783
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     123891783
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123891783
Spliceosome [BR:tpra03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    123891783
SSDB
Motif
Pfam: RRM_1 Cut8 RBD_DEAH11 RRM_occluded RRM_PARP14_3
Other DBs
NCBI-GeneID: 123891783
NCBI-ProteinID: XP_045797629
LinkDB
Position
LG6:17058714..17060935
AA seq 312 aa
MSKKKEMEDLENNNGDFVSNEEIRIFIESLTKPQLVDLLSQLGSKYPSIAQEIESFANVD
RARRNLNAFQVHGKSTQSAPRKSTQSASSAPNKFVRGVCMLDDETRRIRSAPDLSERNLF
IENLSAQVTREMLLDYFERHGDIEECLLVCQRRAGSKVSSYSGIVTYKTAEAAKKAIDDL
DQTTLGGRTITVKYYDTLYGGGQPSVPARIAPMEALHMSPEYVEGYTYPRPGAPYAAPRY
PYPQTGAPFAASPYPYPRTDPPYAVSPYPYPRTDAPHGAPPYPYPRTAARFALPPYPYPQ
TDAPSYAASRYP
NT seq 939 nt   +upstreamnt  +downstreamnt
atgagtaagaagaaagaaatggaggatttggaaaacaacaatggtgactttgtttccaat
gaagaaattagaattttcattgaatctcttaccaaacctcaactcgttgatcttctctct
caactagggtccaaatatccttcaattgcacaagaaatagaaagttttgcaaatgttgat
cgtgctcgtcgaaaccttaatgcatttcaagtgcatggaaaatcgactcagagtgcacca
agaaaatcgactcagagtgcatcgagtgcaccaaacaagtttgttcgtggagtatgtatg
ttagatgatgagaccagaagaatcagaagtgctcctgatctttccgagagaaatcttttt
attgaaaacttatcagcacaagtaacaagggaaatgctgctcgactattttgagaggcat
ggtgatatagaggaatgtttacttgtatgtcaacgtcgcgcgggttcaaaggtatcaagt
tattctggcatcgttacatacaagacagcagaggcagcaaagaaagcgatagatgaccta
gatcaaacgactcttgggggaagaactataactgtaaaatattatgatacattatatgga
ggtggtcagccgtctgttcctgcaagaatagctccaatggaagccttacatatgtctcca
gaatatgttgagggttacacatacccccgacctggtgcaccatatgccgcaccacgttat
ccatacccccaaacaggtgcaccatttgctgcgtctccttatccatacccccgaactgat
ccaccatatgccgtgtctccttatccatacccccgaactgatgcaccacatggtgcacca
ccttatccatacccgcgaactgctgcaagatttgctttacctccttatccatacccccaa
accgatgcaccatcatatgccgcgtctcgttatccatga

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