Trifolium pratense (red clover): 123891881
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Entry
123891881 CDS
T08949
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123891881
Spliceosome [BR:
tpra03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123891881
Other components
Complex C specific factors
123891881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
123891881
NCBI-ProteinID:
XP_045797708
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All DBs
Position
LG6:complement(20158341..20160440)
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AA seq
678 aa
AA seq
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MSMYISMYTFNDDSDSEDHHYCSNTKRRKLGDFERHTKGCGMKLMEKMGYKGGGLGKNEQ
GMLNHIEVILRPKFSGLGSYESKETPILQTEKKCEPGGGFQPIVGRKRERALLNHKKKKE
EDVYVTAEDFLANKQEQVIQKIYDMRGPEVRVYTNLCDLNAEEKAKERDFPMPELQYYIG
LIVLSAEVDFQEIDRDLRNERDIAFSLKSEKENLEDEVVFQNKQLDNYEKIKSVLDRVEE
EKTLGTLTLDSLAQCLRDIHKRYADEDYKLVNLSCIVCSYALPLFIRVFQGWDPLRNPSH
GLELVSQWKTLLQEDDCCDIWDINISSPYADLVSDAVLPAVRISCVNTWQARDPEPMLRF
LESWEKLLPSSVLAFILDNIVMPKLSSAVDAWEPRRETIPIHTWVHPWLPLLGNKLKDIH
QTIRSKLSIVLDSWHPSDGSVYAILSPWKTVFDADRWQQLMHRFIVPKLKAVLKDDKFQV
NPASQNLDQFYWVMNWASAIPIDLMVDMMEIFFEKWLKVLYHWLCSNPNFGEVTNWYLGW
KELIPKELLANQSILYKLKCGLDMMNQAIEGMEVVQPVLKEKTAAASSQQQAAASLVDAV
KVDGANEMSMKELIEAYAQDHGLLFKLKPGRMHNGHQIYRFGNISIIIDSRNQKVYAQND
ETWSLETLERLLELHKRR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtacatctcaatgtacactttcaatgatgattctgattctgaagatcatcat
tactgctctaatacaaagcgaagaaaacttggcgatttcgagaggcatacgaagggatgc
ggaatgaagttgatggagaagatgggttataaaggaggtggtcttggcaagaatgagcaa
ggtatgctgaatcatattgaggtcatattgaggcctaagttttctggtcttggatcttac
gaatcgaaggaaactccgattttgcagacggagaaaaagtgcgaaccgggaggaggcttt
caacctatagttggaaggaagagagaacgtgcattgttaaaccacaagaagaagaaagaa
gaggatgtgtatgtaactgctgaggatttcttggcgaacaagcaagaacaagtcattcag
aagatttatgatatgagggggccagaggtaagagtgtatacaaatttgtgtgatttgaat
gctgaggagaaagcaaaggaaagagatttcccaatgcctgaacttcagtattacatagga
ctaatagttctgtcggccgaggttgacttccaagagattgatagagatttgaggaatgag
agggatatagcatttagcttgaaaagtgaaaaagagaatttggaagatgaggtagtattt
caaaataagcagctggataattatgagaagataaaaagtgttctggaccgtgtcgaagaa
gaaaagaccttaggaacattaacattggattcccttgctcaatgtttgagggacattcac
aaaagatatgctgatgaggactataagttggttaacttgtcatgtattgtttgctcatat
gccttgcctttgtttatcagagtgttccaaggatgggatcctcttcgaaatccatctcat
ggtttggaattggtttcacaatggaagacattgcttcaagaagatgattgttgtgatata
tgggacattaacatatcatcaccttatgctgatttggtttctgatgctgtattgccggct
gttagaatatcttgtgtcaatacatggcaagcacgcgatcctgagccgatgctacggttt
ttggagtcttgggaaaaattgcttccttcttcggttcttgcttttatattagacaacata
gtcatgccaaaattatcaagtgccgtagatgcttgggagccacgtcgcgagacgattcct
atccacacatgggtgcatccatggctacctctgctagggaacaagttgaaggatatccac
cagacgattcgttccaaactgagtattgttcttgattcatggcacccgagtgatggttcc
gtatatgctatattgtccccttggaagactgtatttgatgctgataggtggcagcaatta
atgcaccgttttattgtaccgaagctgaaggctgtcttgaaagacgacaaattccaagtg
aacccggcaagtcagaatcttgatcaattttattgggtaatgaactgggcttcggctatt
ccaattgatctgatggttgacatgatggagatcttctttgagaagtggcttaaagtttta
tatcattggttgtgctcaaatcctaactttggtgaagttacaaactggtatttgggctgg
aaagaacttattccaaaagaacttttggcaaatcaaagtattctatacaagctcaaatgt
ggtcttgatatgatgaatcaggctattgaaggtatggaggtggtgcaacctgttctgaag
gagaagacagcagcagcctcttctcaacaacaggcagctgcaagcttggtcgatgctgtc
aaagtcgatggtgcgaatgaaatgagcatgaaagaactcattgaggcctatgctcaagat
catggtttacttttcaaacttaaacctggtagaatgcacaacggtcatcaaatatatagg
tttggcaatatcagtataataatcgactctcggaatcaaaaggtctatgcccaaaatgac
gaaacatggtctttagaaactctcgaacgattgcttgagttacataaaagacgctga
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