Trifolium pratense (red clover): 123892044
Help
Entry
123892044 CDS
T08949
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123892044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123892044
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
123892044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
123892044
NCBI-ProteinID:
XP_045797850
LinkDB
All DBs
Position
LG6:complement(28185501..28189723)
Genome browser
AA seq
1068 aa
AA seq
DB search
MAGGVSSRTRSKKVPPFHIPSFDSSSSKRRKNDEDVMSLDSASGSKRKRLKDEAFVFPQN
KNAHEVIFIEEEEEEGFKKEVKIDESGGSSEIGDNKDGNFVDEKIGWDSENPIICSDESG
ESDDEEQSVGFYAAEEEEDDETLIIFHDSVYKDDDSDESDDDDDDDDESEENETSDEDFK
VDELDEVSDDDEEKKRMTKDFDELDEVSDRQSGICHMKNEKKGSINNHEIKGCSSSNNKE
ESKKKKAKSVEKNVSDVSDSIEEKQKYGKRRWNNSEKQKKMENNGLNRRGKSAYFTSMDL
RLAKLLSESYSHKKNSMKNDPILPEVNQCDARKPPVCVEAPLIWSLKRVQTVELTEEEEE
ERRKDEALKPIWDEMEMYINESEAESKIGCLWTNEASQGNNGSPSSRCEHDIIYDEQIGD
YCESCGKVITESRYKTQLVIDKYPYEGYEKRASSEGSENSLHLDFSQSRVNVSDGDLDAN
ICQKKGIIWDLIPEVRETLYPHQQEGFEFIWKNLAGNIELQKLKNADPLSEGGCIISHAP
GTGKTRLTIVFLKAYLKLFPNCLPIVVAPASLLLTWEEEFKKWDIGVPFHNISNLELSGK
EHADVLNRFDSTRHRPDETRIVKLISWFKETSILGISYNLYGSICQHKKEKNLESVKETK
GNFDMREVLLEAPGLLVLDEGHIPRNQRSHIWKVLTKSQTQKRIILSGTPFQNNFSELYS
TLSLVKPSFPTMIPPELKSFCHKKGQTSSKQWGREADSGNIERDPSDDDKIEKLKLLMEP
FVHIHKGAILENKLPGLRECLVTLKADSLQNDILKSIKRSQNKVFNFERKIALASVHPSL
FLKCHLSKEEESLLDKDKLKQLRMNPHEGVKTKFVYEFVRLCDASNEKVLIFSQFHAPLQ
LIQDQLNSAFNWSNGEVLFMSSNDSTKDKQSIIHRFNDENSKAKVLLAATKACSEGISLV
GASRVVLLDVAWNPSVKRQAISRAYRIGQKKVVYTYHLLVEGTTEAEKYGKQAEKDRLSE
LLFSAKNATDNDVSKRCAVNFEDEVLDKMTRHEKLMDIFFNIAASLES
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggctggtggtgtttcaagcagaactcgtagcaagaaggttccaccgtttcacattcct
tcgtttgattcttcatcttcaaagagaagaaagaatgatgaagatgttatgagtttagat
tctgcttctgggtcaaaaagaaaaaggttaaaagatgaagcttttgtgtttcctcagaat
aagaatgctcatgaagttattttcatcgaagaagaagaagaagaagggtttaagaaggaa
gtgaagattgatgagagtggaggaagtagtgagattggtgataataaagatggaaacttt
gttgatgaaaagattggttgggatagtgaaaatccgattatatgttcagatgagtctggt
gagagtgatgatgaagaacagtctgttggtttttatgctgctgaagaagaagaagatgat
gaaactttgattatttttcatgacagtgtttataaagatgatgattctgatgagagtgat
gatgatgatgatgatgatgatgagagtgaagaaaacgagacgagcgatgaggattttaaa
gttgatgaactggatgaggtttctgatgatgatgaagagaaaaaaagaatgacaaaagat
tttgatgaactggatgaggtttctgatagacaaagtggaatttgtcatatgaaaaatgag
aagaagggttctataaacaatcatgaaattaagggttgttcttcttcaaacaacaaagaa
gaatcaaagaaaaagaaagcaaaaagtgtggaaaaaaatgtctctgatgtttccgattct
attgaagaaaaacagaaatatggcaaacgaagatggaataattcagagaaacagaaaaag
atggagaacaatggtttgaatcgaagggggaaaagcgcgtattttacatcgatggatttg
agattagccaaactgctttctgaatcctattcacacaagaaaaatagcatgaagaatgat
ccaattctgccggaggttaatcagtgtgatgcacggaaaccaccggtttgtgttgaggca
cctctgatatggagcctaaaaagggttcaaacagtggaactgaccgaagaggaggaggag
gaacggaggaaggatgaagcgttaaagcccatatgggatgaaatggaaatgtacattaac
gaatcagaagctgaatccaagattggatgtttatggacaaatgaagcctcacaaggaaat
aacggaagtccttcatctcgctgtgagcatgacattatttacgacgaacagattggtgat
tattgtgaatcctgtggtaaagttattactgaaagcagatataagacacaactagtgatt
gataaatatccatatgaagggtatgaaaaaagagcttcatcggagggttctgaaaattcc
ttacacttggatttctctcagtctcgcgtcaatgtttccgatggtgatttagacgctaat
atctgtcaaaaaaaaggcataatttgggacctaattcctgaagtgagagaaactttatat
cctcatcaacaggaaggctttgagtttatatggaaaaacttggctggaaatatcgagctt
caaaagttaaagaatgccgatcctctcagtgaaggtggctgcattatttctcatgctcct
ggaaccggaaagacaaggctgacaatagttttcctcaaggcatatttgaagttgtttcca
aattgcttgccaattgttgtcgctcctgctagtttactgctaacttgggaagaggaattc
aagaaatgggacattggagttccatttcacaatataagcaatttagagttatctggtaaa
gagcatgctgatgtgcttaacagattcgatagtacacggcatcgtcctgacgaaacacga
atagtgaaacttatttcgtggttcaaagaaacaagcattcttggaatcagctacaatttg
tacggatcaatttgccaacataagaaagagaaaaatcttgaaagtgtgaaggagacaaaa
ggaaactttgatatgcgagaagttctacttgaagcacctggtttgttagttcttgatgaa
ggacacataccaagaaatcaaagaagtcatatttggaaggtgttgacgaagagtcaaacg
cagaagcgaatcatcctttccggaactccattccagaataatttctcggagctttacagc
actttgagcttagtcaagccttcctttcctaccatgataccgcctgagttaaaaagcttt
tgtcataagaagggacaaacatcatctaaacaatggggaagggaagctgattcaggcaat
atagaaagagacccttctgatgatgataagattgagaagttgaaactgctaatggaaccc
tttgttcatattcacaagggtgcgatccttgaaaataagcttcccgggttaagggaatgt
ttggtgactttgaaggcagatagtttgcagaatgatattctgaagagtattaaacgttct
cagaacaaagtatttaactttgagcgtaagattgcattggcatctgtccatccatctctt
ttccttaaatgtcatctttcgaaagaagaagaatctttactcgacaaggataagctaaaa
cagcttagaatgaacccacatgaaggtgtcaaaacaaaatttgtgtacgagtttgttcgg
ctgtgtgatgcttccaacgagaaagtccttattttcagccaattccatgctcctttacaa
ttaattcaagaccaattaaactcggcttttaactggtctaacggagaagtgctgttcatg
tctagcaatgattctacaaaggataagcagtccataatccaccgcttcaatgatgaaaat
agcaaagcgaaggttctgcttgcagctacaaaagcttgttccgagggaattagcttagtt
ggagcttcaagggtggtgcttcttgatgttgcatggaatccttcggtcaaaagacaggct
atcagtcgagcatataggattggacagaagaaggtggtatacacataccatcttctcgtt
gaagggactaccgaggcagaaaaatatggcaaacaggccgaaaaggatcggttatcagag
ctccttttttcagctaaaaatgccaccgataatgatgtgtccaagcgctgtgctgtgaac
tttgaagatgaagtccttgataagatgacccgacatgaaaagctcatggacatattcttc
aatattgctgcttctttagagagttga
DBGET
integrated database retrieval system
