Trifolium pratense (red clover): 123892192
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Entry
123892192 CDS
T08949
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123892192
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123892192
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
123892192
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC_trans_N
AAA_21
AAA_16
AAA_29
ABC2_membrane_3
ABC2_membrane_7
AAA_25
AAA
AAA_28
nSTAND3
DO-GTPase2
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
123892192
NCBI-ProteinID:
XP_045797964
LinkDB
All DBs
Position
LG6:complement(36453442..36465440)
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AA seq
1157 aa
AA seq
DB search
MMEGGSSFRIGSLSIWRNTDAAEIFSDSFHQEDDEEALKWAAIQNLPTFARLRKGLLTSL
QGEATEIDIENLGLQERKDLLERLVRLAEEDNEKFLLKLKKRIDRVGIDLPTIEVRFEHL
NIEAEAHVGSRSLPTFTNFMVNIVEGLLNSLHVLPSRKQQLNILRNVSGIIKPSRMTLLL
GPPSSGKTTLLLALAGKLDPKLKFYGKVTYNGHEMNEFVPQRTAAYVDQHDLHIGEMTVR
ETLAFSARVQGVGPRYDLLAELSRREKDANIKPDPDIDVYMKREYLLMKRNSFVYIFKLC
QLSLMAIVAMTIFLRTEMHRDSVTHGGIYVGALFFGVVVIMFNGMAEISLVVSRLPVFYK
QRGYLFYPPWAFALPSWILKIPLTLVEAAAWVFLTYYVIGFDPYIGRFFRQYLILVLVHQ
MASALFRLIAAVGRDMNEALTLGSFVLAILFAMSGFVLSKDSIKKGWIWGFWISPMMYGQ
NAMVNNEFLGNSWKHVLPNSTEPLGVEVLKSRGYFTESYWYWIGVVALIGYTLVFNFGYV
LALTFLNPLGKHQTVIPEESQNNEQNGASRNRTNVLKFIKDSFSQHSNRVRNGECTRGSV
SPSTLPSRQETVAAETNHSRKRGMVLSFEPHSITFDEVTYSVGMPQEMKNRGFVEDKLVL
LKGVSGAFRSGVLTALMGVTGAGKTTLMDVLAGRKTGGYIEGNITISGYPKKQETFARIS
GYCEQNDIHSPYVTVYESLLYSAWLRLSPDINAETRKMFIEEVMELVELKPLRNALVGLP
GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCT
IHQPSIDIFESFDELLLLKQGGQEIYVGPLGQYSSNLIGYFEGIQGVSKIKDGYNPATWM
LEVTTPSKEVELGIDFAEVYKNSELYGEKEQDLFNAMGSMYAAVLLIGIKNSTSVQPVVS
VERTVFYRERAAGKYSAFPYAFGQVVIELPYVFVQTVVYCFIVYAMIGFEWNVAKVLWCL
FFMYFTFLYFTFYGMMSVAMTPNSHISTIVSSAFYAVWNLFSGFIIPRPRIPVWWRWYSW
INPVAWSLYGLVASQYGDIKHNIDTNDGRQTVEGFVRNYFGFKHDFLAVVAVVNVAFPIA
FALVFAISIKMFNFQRR
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgatggagggtggaagtagttttaggattggtagtttatcaatttggaggaacactgat
gctgctgagatattttcagattcttttcaccaagaagatgatgaagaagctcttaaatgg
gctgcaattcagaatcttcctacttttgcgcgtttgaggaaaggtttgctcacttcactt
caaggtgaagctactgagattgatatcgagaaccttgggttgcaagaaagaaaagatttg
cttgaaagacttgttagacttgctgaagaggataatgagaagtttttgctcaaactcaaa
aaacgaatcgatagagttggaattgatcttcctacgatagaggttcgattcgaacacttg
aatatcgaagccgaagctcatgtaggaagcagatctttgcctaccttcactaacttcatg
gtcaatatagtagagggcctattgaactctctgcatgtacttccaagtagaaaacaacag
ttaaatattctcaggaatgttagtggaattataaagccttcaagaatgacattgcttttg
ggccctccaagttctggaaaaaccacgctcctgttggccttggctggaaaacttgatcca
aaattgaagttttatggaaaggtgacttataatggtcatgagatgaatgagtttgtgcct
caaagaactgctgcttatgtggatcagcatgatcttcacataggagaaatgactgttaga
gaaactttggccttctcagcaagagtccaaggagtcgggcctcgttatgacttgctagcc
gaattgtccagaagagaaaaagatgcaaatatcaagcctgatccagatattgatgtgtac
atgaagagagaatatttactcatgaagcgcaattcatttgtctacatcttcaagctttgc
caactgtctttaatggcaattgttgcgatgaccatcttcttacggactgagatgcacaga
gattccgtgactcatggcggcatatatgtaggtgcattgttctttggtgttgtggtgata
atgttcaatggaatggctgaaatttccctggtagtttcaaggcttcctgttttctacaag
caaaggggatacctcttttatcctccatgggcatttgctcttccttcatggatcctaaaa
atccctttgactttggtggaagctgctgcttgggtattccttacttattatgtcattggt
tttgatccatatattggaagatttttcagacaataccttattcttgtactagtacaccag
atggcttctgcgttatttagactcattgcagcagttgggagggatatgaatgaggctctc
acacttggatcatttgtacttgccatcctttttgctatgagtggttttgtcctatcaaaa
gatagtataaaaaaagggtggatatggggattttggatatcacctatgatgtacggacaa
aatgccatggtcaataatgagttccttggtaatagctggaaacatgttcttcctaactca
acggagccactaggagttgaagttttgaaatctcgcgggtacttcaccgagtcatactgg
tactggattggtgtggttgctttgattggatatacattagttttcaactttggttatgtc
cttgctctcactttcttgaatccactcggaaagcatcaaactgttattccggaggaatct
caaaacaatgagcaaaatggtgctagcagaaatagaacaaatgtattgaagttcataaag
gatagcttttcacagcactcaaatagagtgagaaacggagaatgtacaagaggaagtgtc
tctcctagtactttacctagtagacaggaaacagttgctgcagagacaaatcatagtagg
aaaagaggaatggttctttcttttgaaccacattcaatcacctttgatgaagttacatat
tctgtaggcatgccgcaggaaatgaaaaaccgaggttttgttgaggataagttagttctt
ttgaaaggtgtcagtggagctttcagatcaggtgttctcactgctctaatgggggtgact
ggtgctggaaaaacaactctgatggatgtgctcgctggtagaaaaactggtggatatatc
gaggggaacatcacaatttctggctatccaaagaagcaagaaacctttgcaaggatttct
ggatactgtgagcaaaatgatatccactctccttatgttactgtctatgagtccttgctc
tattcagcatggctccgattgtcccccgacatcaatgctgaaacccggaagatgttcatt
gaggaagttatggaacttgtagaattgaaaccactacgaaacgcattagtaggactgcct
ggtgtaagtggtctctcgacagagcagcgcaaaaggttgactattgctgttgagttggta
gccaatccttctattatattcatggatgagccaacatctgggctagatgcaagggctgca
gctattgtaatgagaacagttaggaacacagtagacaccggaagaacggttgtttgtacc
atccaccagcctagcattgatatatttgaatcttttgatgagcttttgctacttaagcaa
ggagggcaagagatatatgtggggccacttggacaatattcttccaatttaattggttac
ttcgaaggaatccaaggtgttagcaaaattaaagatggttataatccagcaacttggatg
ttggaagtcacaactccatctaaagaagtggaattggggattgattttgcagaagtgtac
aaaaattcagaattatacggtgaaaaggaacaagatctttttaatgccatggggtccatg
tatgcggctgttctcttaattggcataaaaaattctacttcggtgcagccagtggtttct
gtagaaagaacggtcttttacagagaaagagcagccggaaagtattctgctttcccatat
gcatttggtcaggttgtaatcgagcttccatatgtctttgtacaaactgtggtctattgc
tttatagtttatgctatgattggttttgagtggaatgtggctaaagttttgtggtgtcta
ttcttcatgtatttcaccttcctctacttcaccttctatggtatgatgtcagtggccatg
accccaaacagccacatttccactatagtttcctctgcattctatgctgtatggaatctc
ttctcaggattcataatccctagaccaaggattccagtgtggtggaggtggtacagttgg
ataaatccagtggcttggagtttgtatggattagtggcttcacaatatggagatataaaa
cacaacattgataccaatgatggaagacaaacagtagaaggttttgtgaggaattacttt
ggtttcaagcatgattttctagcagtggttgctgttgttaatgttgcatttccaatagcc
tttgctttggtgtttgccatatcaatcaagatgttcaatttccaaaggcgttaa
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