Trifolium pratense (red clover): 123892464
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Entry
123892464 CDS
T08949
Name
(RefSeq) uncharacterized protein LOC123892464
KO
K08518
syntaxin-binding protein 5
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123892464
Membrane trafficking [BR:
tpra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123892464
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
123892464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Prp19
WDR55
PEP5_VPS11_N
Synaptobrevin
WD40
Lgl_C
KNTC1_N
CPSF_A
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
123892464
NCBI-ProteinID:
XP_045798200
LinkDB
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Position
LG6:24661005..24669856
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AA seq
1119 aa
AA seq
DB search
MFAKKLLHKAVQHHLNHKLLQQGSLQQSELDPRIVIHYGIPSSSSLLAFDPIQRLLAIGT
LDGRLKVIGGDNIEGLLISSKQLPYKYLEFLQNQGYLVGVLNDNDIQVWNLENRSLICSL
QWESNITAFSVISGSRFIYVGDEHGLFSVIKFDAEEGQLSKSSNHLSAKFLREAAGFPES
NDQPIVGILTQPYSSGNRLLIAFQDGLLILWDVSEAKIVFLGGGKDLQLKDGDGNSTETD
TNLPADILEQNMGDKEISALCWASSDGSILAVGYLDGDILFWNLLSAAPSKGQQTTSSKN
VVRLQLSNAERRIPVIVLQWSNSQKSHNDFTGQLFVYGGDEIGSEEVLTVLTLEWSSGME
SLRCIGRADLTLNGTFADLILLPSLGARDLSSKDELFVLTNPGQIHYYNNASLSALTSQQ
NRTASVSAQEFPVLIPMANPSLTVAKLIKLPSQLNSLKTLAEVASVLKTSSAPGSASSSN
WPLTGGVPSHLSTVKGAAIERVYFVGYSNGSVLMCDATHPILSYICYIEGEVIGVKVAGS
NAPVTKLEFCSASLLLAVGNECGLVRIYDLKDRSDEKKTKLVTETKNEVHDSPQAKGPHC
SAVFSLVGFPVQALSFANSGTKLAIGFLSGRVAVCDMKSLSVLFLIDGVPNSSSPITSMV
WKQPCFESAVNSPKKPETPSGKSLEEILFILSRSGKINVVDGETGKMISSRPFHMKESTA
ISMYVIDDSISTSEASNEKQQEEPLKSTSGAHPEEPMQESSSTRLNSSEAELSSSETTHS
GEILLYPLVLLCCENSLHLLSAKTLIQGNKKSIRKVEHLKPCYWTTILKKDDKFCGILSL
LQTGTFEIRSLPDLELVTESSLLSILRWNYKVNMDKTMCSDDNGQIVLANGSELAFISLL
ASEKEFRSLERLPCLHDIVLAAAADAAFTFSSNQKKKQTSVPGILGGIVKGLKAGKISHA
NMTKISTSNFGHLEDIFFKPSLPESLPAVSVVTDEKEVELDIDDIQIDEPKTTASTSSPD
VKNKQKDKLQNDRDKLFHGGTNDDVKPRVRTPEEIMAAYRKTGDAASVAAQTRNKLMERQ
EKLERISQRTADLQNGAENFASLANELVKTMERRKWWQI
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaaaaattgttacacaaagctgtccaacaccatttaaaccacaagttgctg
cagcaaggtagtttacaacaaagtgaattggatccaagaattgtgattcactatggcatt
ccatcttcttcttcacttctcgcttttgaccctattcagagacttttggctattgggact
ttggatggaagacttaaggtgattggcggtgataatatcgaaggacttttgatttcttct
aagcaacttccttacaaatacttggagttcctacaaaaccaggggtatttagttggggtc
ttaaatgataatgatatccaggtttggaatcttgagaatcggagccttatttgttcgtta
caatgggaatccaatattaccgctttctctgtaattagtggctcacgtttcatttatgtt
ggagatgagcatggcttgttttctgtgataaagtttgacgctgaggaaggacaactttca
aagtcatcaaatcatttatcggcaaaatttctaagggaagctgccgggtttccagagtcc
aacgatcaaccaattgtcggaattcttacgcaaccttattcttctgggaacagattgttg
attgcgtttcaagatggactactaattctttgggatgtttctgaagctaaaattgtgttc
cttggtggtggaaaggatcttcaattgaaagacggggatggtaactctactgaaacggac
accaatcttccagctgatattttagaacaaaatatgggcgacaaagagataagtgctctt
tgttgggcatcttctgatgggtccattcttgctgttggatacttagacggagatatcctt
ttttggaacttgttatctgcagcaccttccaaaggtcaacaaaccacttcatctaaaaat
gttgttaggctacaactgtccaatgcagaaagaagaatccccgtcattgtcttgcagtgg
tccaatagtcaaaaatctcataacgactttactggtcagttgtttgtctatggtggtgat
gaaattggatcggaagaagttttgaccgttttaactcttgaatggtcatctgggatggaa
tcattaagatgcatcggtcgcgcagacctcacacttaatggcacttttgctgatttgatt
ttattgccaagtctaggagcaagggatttgagtagcaaagatgagctttttgtactgaca
aaccctggacaaatacactattataataatgccagcttgtctgcgttaacgtctcagcag
aataggacagcatctgtatctgcgcaggagtttccagtactaatacctatggctaatcca
tctttgactgttgcaaaacttatcaagttgccgagtcagttaaactcattgaaaactcta
gctgaggtagcctcagttctgaaaactagctcagcacctggttcagcttcttcttcaaat
tggccgttaactgggggtgttcctagccacttgtccacagttaaaggtgctgcgattgag
agagtttattttgttggttattctaatggatctgtcctcatgtgtgatgccacacatccg
atcttgtcttatatttgctacatagaaggagaggttattggtgtaaaagtggctggatca
aatgctccagtgacaaaattggaattttgttccgcttccttacttctggctgtgggcaat
gaatgtggtcttgttcgcatttatgaccttaaagaccgctctgatgagaaaaaaaccaag
cttgttacagaaacaaaaaatgaagtccatgattctccacaagcaaaaggacctcattgc
agtgctgttttttctcttgtcggttttccagtacaagcattatcttttgcaaattctgga
accaaacttgctattggatttttaagtggtcgtgttgcagtctgcgatatgaaatcgttg
tcagttttgttcttgattgacggtgtacctaactcaagctcaccaattacttcaatggtt
tggaaacaaccatgttttgaaagtgctgtaaatagtccaaagaaaccagaaacaccttca
ggcaaatctcttgaagagatactatttatcttatccagaagtggaaaaattaatgtagtt
gacggtgaaactggtaaaatgatctccagccggccgtttcatatgaaggaatcaactgca
atttcaatgtatgttatagatgatagcatctcaacctccgaagcgtcaaatgaaaagcag
caggaggaacccttgaagagtacttctggtgctcatcctgaagagcctatgcaagaaagt
agctcaactaggttaaattcatcagaggctgaactttcgtcttcagaaaccacgcactcc
ggggaaatccttttgtatccacttgtcctgctttgctgtgaaaattcattgcacttgttg
tccgcaaaaacattgatacagggaaacaaaaaatcgattcggaaagtagaacatttgaaa
ccttgctattggactacaattttgaagaaagatgataaattttgtggaattctatcattg
ctccagactggaacatttgaaataagatcattaccagatttggaactggtgacagaaagt
tctttattatcgattttaaggtggaattataaagtgaacatggataaaaccatgtgttct
gatgataatggacagattgtgctggctaatggttctgaattggcattcatctcattacta
gctagcgaaaaggaatttaggagtctggagcgtttgccttgtcttcacgatatagttctt
gcagctgctgctgacgctgcgtttacattctcttcaaatcagaagaaaaaacagacaagt
gtgccggggattctagggggtatcgtcaaaggattgaaagcaggaaaaatctctcatgca
aatatgactaaaatttcaacctccaatttcggtcatttggaagacatttttttcaagcct
tccttgcccgaatcgcttccagcagtgtcagtagtgaccgatgaaaaagaagtggagctt
gatatagatgacattcaaatagatgagcctaaaactacagcatctacttcatctcccgat
gttaaaaacaaacagaaagataagttgcaaaatgatagggataaattatttcatggtggg
actaatgatgatgtaaagccaagagttagaacaccggaagagattatggctgcttacaga
aaaactggggatgctgcttcggttgccgctcaaacaagaaacaagcttatggagaggcag
gaaaaattggagagaataagccaacgcacggcagacctgcaaaatggagctgaaaatttt
gcatcattagcaaatgagcttgtcaagaccatggaaaggagaaaatggtggcaaatatag
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