Trifolium pratense (red clover): 123892474
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Entry
123892474 CDS
T08949
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123892474
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123892474
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
DUF4399
Motif
Other DBs
NCBI-GeneID:
123892474
NCBI-ProteinID:
XP_045798212
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All DBs
Position
LG6:complement(28009330..28021070)
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AA seq
879 aa
AA seq
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MNLRYEQRLQVAARIILDDDASSCDAPPSEEELGIRATLKPHQVEGVSWLIRRYKLGVNV
VLGDEMGLGKTLQAISFLSYLKVHQLSHGPFLVICPLSVTDGWVSEIVKYAPKLEVLKYV
GDKDCRRSLRMKTHEHVTRQPTDNQAILPFDVLLTSYDIALMDKDFLSQIPWQYAIIDEA
QRLKNPSSVLFNVLKDRYIMPRRLLMTGTPIQNNLSELWALMYFCMPSVFGTLDQFLSTF
RDISDLTSVHDSPKVKERLQILRNVLTAFMLRRTKSKLMESGSLVLPPLTETTVLVPLVS
LQKKVCMSILRKELPKLVALSSGTSNHQSLQNTVLQLRKACSHPYLFPGIEPEPYEEGEH
LIQASGKLLILDQLLRKLHHYGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSIRAEE
RFAAIRSFSNSSANTGLNFEADQNGAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVD
RQALQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLSLNVTGDNILEHDDKNLTE
VGTSDLKSIIVGLRMFDPNEINDGKDKEMDLTEINAMADKVIAIRDEQTFDKDDRKFEVN
PRNVLKGYDVKERGSASLSCDLDLDEASYLSWVKKFEEVSKSSCDSIIDLRSRRNLDEEK
SQKLEIAKKKAEEKKLSKWDAAGYHSLNVNEPISPPDDDIILDAGSVHFVYGDCTAPSNV
SSSEPAIIFSCVDTSGRWGHGGMFDALTKLSSSISEAYERASEHGDLHLGDLHLIRLEDG
SDDQNLDGNASNMVALAVIQSYNPRRKIPRSEISLVHLESCLSKAAFSAAQNSASIHMPR
IGYQDGSDRSQWYTIERLLRKYASMYNISIYVYYYRKSR
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgagatacgaacagaggcttcaagtcgctgctagaataatacttgacgacgat
gcaagttcctgtgacgcgccgccgagtgaagaagagctcgggattagggcaacactgaag
cctcaccaagttgaaggggtttcgtggctcattcggaggtataaactcggcgttaacgtt
gttctcggggatgagatgggattgggcaagacattgcaagctatctcatttttaagctat
ttgaaagtgcaccagttgtcacatgggccatttttggttatatgtcctttaagtgtgaca
gatggttgggtatctgagatagtcaaatatgccccgaaactagaagtccttaaatatgtt
ggtgataaagattgtaggcgaagtttacgtatgaaaacacatgagcatgtaacaaggcag
ccaacagataatcaggccattttgccttttgatgtgctgttaacatcatatgacattgca
ctgatggataaggattttctttctcaaataccatggcagtatgcaatcatcgatgaagcc
caaaggcttaaaaacccatcaagtgttttatttaatgttctcaaagaccgctatatcatg
ccaagacggttgttgatgacgggcacacctattcagaataacctttctgaactgtgggcg
ttgatgtatttttgcatgccatctgtctttgggacactagatcagttcctttctacattc
agggacatcagtgatcttacctcagttcatgattctccaaaggtaaaggagcgacttcaa
atcctgagaaatgtattgactgcttttatgctacgacgaaccaaatcaaagcttatggag
tccggaagtttagtgctgccacctctcactgagacaacagtgttagtaccccttgtcagc
ctgcaaaaaaaggtctgcatgtcgatactgaggaaagaacttccgaagctagttgcacta
tcttctggaacatcaaatcaccaatcattacagaatactgtattacaactaagaaaagca
tgcagccatccttatctctttccgggtattgaacccgaaccttacgaagaaggtgaacat
ctgattcaggccagtggtaagctattgattctggaccaacttcttagaaagctacatcat
tatggccatcgtgttcttctttttgctcagatgacacatacacttgacattttgcaggat
tttctggagttacgtaagtattcttatgagcgtcttgatggatcaattagagctgaggag
cgctttgctgcaataagaagtttcagcaactcatcagctaatacaggcttgaattttgaa
gctgaccaaaatggagcttttgtttttatgatctcaacaagagctgggggagttggcttg
aatcttgtggctgctgatactgttatattctacgagcaagattggaacccgcaggtggac
agacaagctttgcagagagcacatagaattggccagatgaatcatgttttgtgtataaac
cttgttactgaacatacagtggaggaagtaattatgcggagggcagaaagaaaattgcag
ctgagcctcaatgttacaggtgataatattctggaacatgatgataaaaatttaactgaa
gttggaactagtgatttgaaatccatcatagttgggttgcgtatgtttgatcccaatgag
atcaatgatggaaaagacaaggaaatggacttaacagaaattaatgcaatggctgacaag
gtgattgctattcgtgatgaacaaacatttgataaggatgacaggaaatttgaggtcaat
ccaagaaacgttttaaaaggatatgatgttaaggaaagaggttctgcttctctctcttgt
gatcttgatcttgatgaagcttcttatctctcttgggttaaaaaatttgaggaagtttct
aaatcaagttgtgactcaatcattgacttgagaagcagaaggaacttagatgaggaaaag
agtcaaaaacttgagattgcaaagaagaaggcagaagaaaagaagctgtctaagtgggac
gctgctggataccattcattgaatgtgaatgaacctattagccctccagatgacgatatc
atattagatgctggttctgttcattttgtgtatggagattgtacagctccctcaaatgtt
tcttcatctgaaccagccataatcttcagctgtgttgacacctctggacgctggggccat
ggtggaatgtttgatgcactaactaaactttcatcaagcatcagtgaagcatatgaacgg
gcatctgaacacggggacctgcatcttggtgatctccatcttataaggcttgaagatggc
agtgatgatcaaaatttggatggtaatgcttccaacatggttgctttagctgtgattcaa
tcttacaacccaaggcgtaaaatccctcgaagtgaaatctcacttgtccacttggaaagc
tgcttatcaaaagcagcgttctcagccgctcaaaattctgcatcaatacacatgccacgg
attggttatcaagatggatctgatcgttctcaatggtacaccatagaacggcttctaaga
aaatatgcctccatgtacaacataagtatatacgtgtattattatcgaaaatcacgttaa
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