Trifolium pratense (red clover): 123892502
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Entry
123892502 CDS
T08949
Name
(RefSeq) myosin-6-like isoform X1
KO
K10357
myosin V
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
123892502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123892502
04131 Membrane trafficking [BR:
tpra04131
]
123892502
03029 Mitochondrial biogenesis [BR:
tpra03029
]
123892502
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tpra04812
]
123892502
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
123892502
mRNA cycle factors
P-body specific factors
123892502
Membrane trafficking [BR:
tpra04131
]
Others
Actin-binding proteins
Myosins
123892502
Mitochondrial biogenesis [BR:
tpra03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
123892502
Cytoskeleton proteins [BR:
tpra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
123892502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
APS_kinase
DUF87
DUF1744
AAA_22
ProQ_C
Motif
Other DBs
NCBI-GeneID:
123892502
NCBI-ProteinID:
XP_045798253
LinkDB
All DBs
Position
LG6:36702207..36730998
Genome browser
AA seq
1510 aa
AA seq
DB search
MAATAIPIVGTHVWVEDSDVAWIDGEVLEVNGEEVKVLCTSGKTVVVKASDVFHKDTEVP
PCGVDDMTKLAYLHEPGVLNNLRSRYDINEIYTYTGSILIAVNPFIKLPHLYDSHMMAQY
KGAGFGELSPHPFAVADNAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRA
TVAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLL
ERSRVCQVSDPERNYHCFYMLCAAPPEEVKKYKLGHPRTFHYLNQSSCYELEGVDESKEY
NAIRRAMDVVGISSVEQDAIFQVIAAILHLGNIEFAKGEEFDSSMPKDEKSRFHLQTAAE
LFMCDAKALEDSLCKRVIVTRDETITRWLDPEAAALSRDSLAKIVYTRLFDWLVDTINNS
IGQDPESKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEI
DWSYIEFVDNQDILDLIEKKPGGIISLLDEACMFPRSTHETFSQKLYQTFKDHKRFSKPK
LSPTDFTICHYAGDVTYQTEFFLDKNKDYVVAEHEALLYASKCPFVSGLFPPSPVETSKQ
SKFSSIGSRFKQQLQSLLETLSSTEPHYIRCVKPNNLLKPAIFENKNVLVQLRCGGVMEA
IRISCAGYPTRKAFDEFVDRFGLLAPEALDRSSDEVTACKRILKNVQLEGYQIGKTKVFL
RAGQMAELDTRRSEILGKSASIIQRKVRSYLARRSFILLRLSAVQIQAACRGQLARQVFE
GMQREASSLLIQRYFRMHIARKAYKELYASAVSIQTGMRAMVARLELHFRRRTSAAIVIQ
SHCRKYMARLHFTKLKKAAIATQCAWRGKVARRELRKLKMAAKETGALQDAKNKLEKQVE
DLTLRLQLEKRLRVDIEEAKAKENERLNSALQKMQHQYKETKSLLEKEREATKRLEERVP
VIQEVPVVDHDLLEKLKSENETLKNLVSSLEKKIDETEKKYEEETKLSEERLKQALDAES
KIIQLKTDMQRLEEKFTDVEFANQLLQKQSLLNTPVKTTAEHLSSPVSKKLGNGYHVEEE
QNDVDTFVTPVKQYVTESDSKLKRSCSERYYGSFDSLVNCVSKNIGFNHGKPVAAFTIYK
CLLHWKSFEAEKSSVFDRLIQMIGSAIEDQDDNDLMAYWLSNTSTLLFLLEQSLKSGSSK
NATSVGKPPNPTSLFGRMTMGFRSSPSSANLAAPSSVVVRKVEAKYPALLFKQQLTAYLE
KIYGIVRDNLTKELTSVLALCVQAPKTYKGALRSGRSFGKDSPMVHWQSIIESLNNLLCT
LKENFVPPVLIRKIFSQTFSFINVQLFNSLLVRPGCCTFSNGEYVKAGLAELELWCCQAK
EEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIVNDLCPILSVQQLCKICTLYWDDIYN
TQSVSPHVLASMRMDLDSNNSPNDSFLLDDSSSIPFSVDDLSASLQDKDFSDMKAADELL
ENPAFQFLIE
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaccgccattcctatagttgggacccatgtttgggtggaggattctgatgta
gcttggatagatggcgaggtcttggaggttaatggagaagaagtcaaagtcctttgcact
tcgggaaagacggttgttgtcaaagcttccgatgtttttcataaagataccgaagttcca
ccatgtggagtggatgatatgacaaagctcgcatacctgcatgagcctggagtcctaaat
aatctgagatcaagatatgatatcaatgaaatttatacttacactgggagtatattgatt
gctgtgaaccctttcataaagcttcctcatttatatgatagccatatgatggcacaatat
aaaggtgcaggttttggcgagttaagtccacacccctttgctgttgcagacaatgcgtat
aggctcatgataaatgagggaatcagccagtcaatattggttagtggtgaaagtggagcc
ggtaaaacagaaagtactaagttactcatgcgatatcttgcttacatgggggggagagcc
actgttgctgaaggtagaaccgtcgagcaaaaagtccttgagtcaaatcctgtcctagaa
gcatttggcaatgcaaagactgtgaggaacaataattcaagtcgtttcggtaagtttgtg
gagattcaatttgataaaaaaggaagaatatcgggcgctgctatcagaacctatctgctg
gaaagatcacgtgtttgccaggtgtcagatccagagaggaattatcactgtttctacatg
ctttgtgctgcacctccagaggaagttaagaagtacaaattaggacatccaagaacattt
cattatctgaatcaatcaagttgctatgagttggaaggggttgatgaatctaaagaatat
aatgctataaggagggcaatggatgttgttggaataagttctgtggagcaggatgcaata
tttcaagttattgctgccattttgcatcttgggaacattgaatttgcgaaaggggaggag
tttgattcatctatgcccaaagatgaaaaatcccggttccacctacagactgcagctgaa
ctttttatgtgtgatgcaaaggcacttgaagattctctttgcaaacgtgtaattgttact
cgcgatgaaacaattacaagatggctggatccagaagctgccgcactcagtcgagactct
ttggctaagattgtatacacaagattgtttgactggttggttgatacaataaataactcc
attggtcaagatcccgagtcaaaatctttaattggtgtgttggatatttatgggtttgag
agtttcaaaaccaacagttttgagcaattttgtattaatttgaccaatgaaaagcttcag
caacattttaatcagcatgttttcaaaatggagcaagaggaatacaaaaaagaagaaatt
gattggagttacattgaatttgtggataatcaagatatactggatctgattgaaaagaaa
cctggtggcattatttcgcttttggacgaagcttgtatgtttcctagatcaacgcatgaa
actttttcccaaaagttgtatcagaccttcaaagaccataaaaggtttagcaagcccaaa
ttatcaccaactgacttcacaatttgccattatgccggtgatgtcacttatcaaactgag
ttcttccttgacaagaacaaagattatgttgttgcggaacacgaggcacttctttatgct
tccaaatgtccctttgtatctggcttgtttcccccttcacccgtggaaacttccaaacaa
tcaaagttctcttcaataggttccagatttaagcaacaattgcaatctttacttgaaact
ctaagttccactgagccacactacattcgatgtgtgaaacccaataatcttcttaagcca
gcaatttttgagaataaaaatgttttggtgcaactgcgctgtgggggagttatggaggca
attcggattagctgtgccggttatcccactagaaaagcctttgatgaatttgtggatcga
tttggccttcttgctcctgaagcattagatcgaagttctgatgaggtcactgcttgcaag
aggatcctaaagaatgttcaacttgaaggttatcagattggtaaaacaaaggtgtttctt
cgagctggtcaaatggcagaactagatacacgtagaagtgagatcttagggaagtcagca
agtattattcagaggaaagttcgttcatatttggcacgtcgaagtttcattttgcttcgt
ttgtcagctgtgcagattcaagctgcatgcagaggacaacttgctcggcaagttttcgag
ggaatgcaacgggaggcttctagtcttcttattcaaaggtatttccgcatgcatattgcc
aggaaggcgtataaagaattgtatgcctctgctgtctctatccagactggtatgcgggcg
atggttgctaggcttgagctacactttagaaggaggactagtgcagcaattgtcattcag
agccactgtaggaaatacatggcacgactacatttcacgaaattaaagaaggcagcaatt
gccacacaatgcgcatggagaggaaaggtggccaggcgagaactgcggaaactcaagatg
gctgcaaaagaaacaggggctctccaagatgccaaaaataagcttgaaaaacaagttgaa
gacctcacattaaggttgcagctggaaaaacgtttaagggtggacattgaagaagcaaaa
gcaaaagaaaatgaaagattaaactcagctttgcaaaagatgcaacatcagtacaaagaa
actaaatcacttcttgaaaaggagcgggaggctactaaaagattggaggagagagttcct
gtgatacaggaggttccagttgttgaccatgatttgttggagaagctaaaaagcgaaaat
gagacactcaagaacttggtgagttcattggaaaagaaaattgatgaaacggaaaaaaag
tatgaagaggaaaccaaacttagcgaagaaaggttgaagcaagctttggatgcagaatcg
aaaataatccagctgaagactgatatgcaaaggcttgaagagaaattcacagacgtggaa
tttgcaaatcaacttctgcagaaacaatctctgttaaacacacctgtgaaaacaactgcc
gagcacctctcttcccctgtatctaagaagttgggaaatggttaccatgtcgaagaagaa
cagaatgacgttgatacatttgttacaccggtgaaacaatatgttaccgaatctgactcg
aagttgaagagatcgtgcagtgaacgatattatgggagttttgattcacttgtcaactgt
gttagtaaaaatattgggttcaatcatggaaagcctgttgccgcatttaccatatacaaa
tgtcttctccactggaaatcatttgaagctgaaaaatccagtgtatttgatcgccttatc
cagatgattggttctgcaattgaggatcaagatgacaatgatcttatggcctattggctg
tcaaatacatcaacattgttgtttttacttgaacaaagcttgaaatctgggagttcaaaa
aatgcaacctcggttggaaaaccacctaacccaacatccctctttggaagaatgactatg
ggttttcgttcatccccttcttctgccaaccttgctgccccctcatcggtggttgtacgc
aaggtagaggctaagtaccctgcattgcttttcaagcagcagctcacagcctatttggag
aaaatatatggcatcgttcgagataacttgacgaaggagttaacatcggttcttgcatta
tgtgtccaggcaccaaaaacatataagggagcgttacgatctggccggtccttcggtaaa
gattccccaatggttcactggcagagtattattgaatccctcaacaacctcctctgtaca
ctgaaagagaactttgtgcctccggttcttatccgaaagatcttcagtcaaacattttca
tttattaatgtgcaactcttcaatagtcttctagttcgtcccggttgttgcacattcagc
aatggagaatatgtgaaagctggattagctgaattagagctgtggtgctgccaagcaaag
gaggagtatgcaggatcgtcttgggatgagctcaagcacataagacaggctgttggattc
ttggttattcatcagaagtataggatatcctatgatgaaatcgttaacgatttatgccct
atcttgagtgtccagcagctatgtaaaatatgtacactttactgggacgatatctacaat
acacaaagcgtatcaccacatgtcctggcaagcatgaggatggacttggactccaataat
tctccgaatgattctttcttgttggatgacagttccagcattcccttctcagtggatgac
ctctctgcatccctacaagataaggacttctcagacatgaaagcagcagatgaacttctt
gagaatccagctttccaatttctaattgagtag
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integrated database retrieval system
