KEGG   Trifolium pratense (red clover): 123892533
Entry
123892533         CDS       T08949                                 
Name
(RefSeq) exosome complex component RRP41 homolog
  KO
K11600  exosome complex component RRP41
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123892533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpra03019]
    123892533
Messenger RNA biogenesis [BR:tpra03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     123892533
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     123892533
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 123892533
NCBI-ProteinID: XP_045798298
LinkDB
Position
LG6:21164687..21168530
AA seq 241 aa
MEYVSPEGLRLDGRRPMEMRQIRAEIGSVSKADGSAIFEMGNTKVIAAVYGPREVQNRSQ
QMSDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIY
VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD
VTVGILPKLDKVTLLQMDSKLPIDILENVMQLATEGCKAIANYIREILLENTKQLEYRRG
S
NT seq 726 nt   +upstreamnt  +downstreamnt
atggagtacgttagcccagaaggacttcgcttggatggtcgccgacccatggaaatgcga
caaattcgagcagagattggttctgtatccaaagctgatggctctgccattttcgagatg
ggtaataccaaagtgattgctgctgtttatggccctagagaggttcaaaataggagccag
caaatgagtgaccaggctctggttcgatgtgaatacagcatggctaattttagcactggt
gatcgcatgaggaaaccaaagggagacaggagatcaactgaaatttctttggttattcga
caaaccatggaagcatgcatattgacacatttaatgccccgttcccagatagatatttat
gtccaagttctccaagcagatggaggaactagatctgcttgtataaatgctgcaactttg
gccttagctgatgctgggatccctatgcgtgatcttgtaacttcctgtagtgctggatac
ctcaatagcacccctctgcttgatttgaactacgtagaagacagtgctgggggtcctgat
gtaactgtaggaattctaccaaagttagataaagtgacacttcttcaaatggattctaaa
ctaccaattgacattttggaaaatgtcatgcaactggctacggaaggctgcaaagcaatt
gcaaactacatacgagaaattttgctagagaacacaaagcaacttgagtatcgacggggt
tcatag

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