KEGG   Trifolium pratense (red clover): 123892583
Entry
123892583         CDS       T08949                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123892583
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpra03041]
    123892583
Spliceosome [BR:tpra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    123892583
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    123892583
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 123892583
NCBI-ProteinID: XP_045798397
LinkDB
Position
LG1:complement(12801814..12805592)
AA seq 394 aa
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNDDYKYVRILGAFYLRLTGSDTDVYHYL
EPLYNDYRKLRRKLADGNFALTHVDEVIDELLTTDYSCDIAMPRIKKRWTLESLGALEPR
QSALEEDFEEEEENEDNEQPAEELEDKAHEKDYYRGRSPARERDRDRRRDSHRHRDRDYD
RDYDRDYDRERGRGRDRDRDRDRDRENERDRDRERDRDRYRLREEKDYGREREGRERERR
DRDRDRGRRRSYSRSRSRSRDRKEHDGGESRKRHARNSISPRRHGDGAEDGEPKKKKEKK
EKKEKKDDGTDHPNPEIAEANKLRASLGLKPLRM
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggcgaatcgtactgatccagcagctaagagcataagaggaacaaaccctcagaaccta
gttgagaagattctccgctccaagatctaccagaacacatattggaaggaacaatgtttc
ggtttaacggcggagacattagtcgacaaggccatggaactcgaccacctcggcggtaca
tacggtggtaaccggaaacccactcctttcatgtgcctcgtcatgaaaatgctccagatt
cagcctgagaaagaaatcgtcatcgaattcatcaaaaacgatgattacaagtatgtgagg
atacttggtgcattctatttgcgtcttactggatctgatactgatgtgtaccattatctg
gagccattatataatgattataggaaactgcggcgaaaattagctgatggaaactttgct
ttgacacatgttgatgaggtaattgatgaacttctcacaacagattattcctgtgatatt
gctatgccgcgtattaagaaaaggtggactcttgaatctcttggtgcattagaacctaga
caaagtgcacttgaagaagattttgaagaggaagaggagaatgaggataatgaacagcct
gctgaggagcttgaagataaagcccatgagaaggattattatcgtgggcgaagccctgca
agggagagagatagggatagaagacgtgatagtcatagacacagggatcgcgactatgac
agagattatgatagagattatgacagagagcgtggacgtggccgagatagagatagagac
agggacagggatagggaaaatgaaagggacagagatagggagagggacagagacagatat
cgtctgagggaagaaaaggattatggtcgtgagagagagggtagggagcgtgagaggaga
gacagggatcgtgaccgcggtaggaggaggagctactcaaggagccgaagtagaagcaga
gatcgcaaggaacatgatggtggtgagtccagaaagagacatgctcggaatagcataagt
cctagaaggcatggagatggagctgaggatggcgagccaaagaagaaaaaggagaagaaa
gaaaagaaggaaaagaaggatgatgggactgaccatccaaatccagagattgccgaagca
aacaagttacgagcatcactgggtttgaaaccactgaggatgtga

DBGET integrated database retrieval system