Trifolium pratense (red clover): 123892961
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Entry
123892961 CDS
T08949
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123892961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123892961
03012 Translation factors [BR:
tpra03012
]
123892961
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123892961
Translation factors [BR:
tpra03012
]
Eukaryotic type
Release factors
123892961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
17kDa_Anti_2
Motif
Other DBs
NCBI-GeneID:
123892961
NCBI-ProteinID:
XP_045798818
LinkDB
All DBs
Position
LG6:complement(10582731..10585858)
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AA seq
437 aa
AA seq
DB search
MADGESDKNIQIWKIKNLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNI
KSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTILTDDGKEKKVTIDFEPFRPINV
SLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGR
GGQSALRFARLRMEKRHNYVRKTAELATQHFINPATSQPNVAGLILAGSADFKTELSQSD
MFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQETGK
YVYGVDDTLKTLEMGAVETLIVWENLDINRYVLKNATTGEIVIKHLKKDQEADQSNFRDA
ATNADLEVQEKMPLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDIR
SFDELSDDDGGVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggtgaatcagacaagaacattcagatatggaagataaaaaatttgatcaaa
gcactggaagctgcaagaggtaacggtactagcatgatttctctgataatgcctccacgt
gatcaaatatctcgtgtcactaagatgttgggagatgaatttggaactgcttcaaatatc
aaaagtagggtaaaccgacaatctgtgcttggtgccattacttctgctcaacagaggttg
aaactatataacaaggttcctccaaatggattggtcctttatactggtaccattctcact
gatgacggcaaggaaaagaaagtgacaattgattttgaacctttcagaccaatcaatgta
tcactttatctctgtgataacaaatttcatacagaagctctaaatgaacttctagaatct
gatgacaagtttggttttattgttatggatggaaatggaactcttttcggaactctaagt
ggaaatactcgtgaggtgcttcataaatttactgtggatctaccaaagaaacatggtaga
ggagggcagtcagctttgcgttttgctcgtcttcgcatggaaaaacggcacaattatgtt
aggaagactgcggaacttgctactcagcatttcatcaaccctgctactagtcaacctaat
gttgctggacttatacttgctggttcggctgacttcaagactgagctgagccagtcagat
atgtttgatccacgtttgcaagcaaaaatattgaacgtggttgatgtttcctatggtggg
gaaaatggctttaaccaagctattgaattatctgctgagattctatctaatgtgaagttc
atacaagagaaacgcttgataggaaaatattttgaagagataagtcaagaaaccgggaaa
tatgtttatggagttgatgacacattgaagacccttgagatgggtgctgttgaaacactc
attgtatgggaaaatttggatataaataggtatgtactgaaaaatgctaccacgggtgag
attgtcataaagcatttgaagaaggatcaagaagctgatcaaagcaacttccgcgatgca
gctaccaatgcagacttggaggttcaggagaagatgccattacttgagtggtttgctaat
gagtacaaaaaatttggatgctcgctggaatttgtgaccaacaaatctcaagaagggtca
cagttttgcagggggtttggtggcattggaggtatgcttcgttaccagcttgatatcaga
tcatttgatgagttatctgatgatgatggtggagtgtacgaggattccgattaa
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