KEGG   Trifolium pratense (red clover): 123893029
Entry
123893029         CDS       T08949                                 
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03022  Basal transcription factors
tpra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    123893029
  09124 Replication and repair
   03420 Nucleotide excision repair
    123893029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tpra03021]
    123893029
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123893029
Transcription machinery [BR:tpra03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     123893029
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     123893029
SSDB
Motif
Pfam: MAT1 F420_oxidored
Other DBs
NCBI-GeneID: 123893029
NCBI-ProteinID: XP_045798900
LinkDB
Position
LG6:19286707..19293867
AA seq 185 aa
MVITSTNPHYKEIAIRKRIASIFNKREDDFPSLKEYNDYLEEVEDMTFNLIEGIDLAAIE
ARIAKYQEENAEQIMINRARKAEELAAAMAASKGQPAQTDNDDASQNSQAGFGAVPQGQY
APTVAGGQPRPTGMGPQPLPLGGGDAGYVVENEETLRRRARAGGWSIEISKKRALEEAFG
SIWIS
NT seq 558 nt   +upstreamnt  +downstreamnt
atggtgatcactagtaccaatccgcactataaggagatagccatcaggaagaggattgct
agcatattcaataaacgtgaagatgattttccatctttgaaagagtacaacgattatttg
gaggaagtagaagacatgacgtttaacttgattgaaggaattgatcttgcggctattgaa
gctaggattgctaaataccaagaagaaaatgcagaacaaataatgattaatcgagcccga
aaggctgaagaattagctgcagctatggcagcaagcaagggacaacctgcccaaactgat
aatgatgatgcaagccaaaattcccaagctggatttggtgctgtccctcaggggcaatat
gcacctacagttgcaggaggacagcctagacccacaggcatgggaccacaacctttaccg
cttggaggcggtgatgccggctacgtagttgagaacgaggaaacattgaggcgacgagca
agggctggaggatggagtatagaaataagcaagaagagggcacttgaagaagcttttgga
agcatttggatttcttag

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