Trifolium pratense (red clover): 123893539
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Entry
123893539 CDS
T08949
Name
(RefSeq) syntaxin-32-like
KO
K08490
syntaxin 5
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
123893539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123893539
Membrane trafficking [BR:
tpra04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
123893539
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Use1
DUF7310
ANIS5_cation-bd
CREPT
Motif
Other DBs
NCBI-GeneID:
123893539
NCBI-ProteinID:
XP_045799214
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Position
LG7:complement(4624234..4627928)
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AA seq
346 aa
AA seq
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MQFKSTQSSFRDRTHDFHTVAERLKKSLSSSSSGSGPNGPSSSSPYPSSSSPSSSSSRSE
DPRSAVAIQSEFNRRASKIGFGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTSVIKQD
ITALNSAVVDLQLVSNSRNESGNVSTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTEN
LKVHENRRQLFSANASKDSANPFIRQRPLATKSAASSSNAPAPPWASGKQVDGESQPLLQ
QQQQQQQIVPVQQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRIDENMD
DTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLMFFLMVFLFFVA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcaaatcaacacaatcctcatttcgagatcgtacacatgatttccacaccgtt
gcagagagattgaagaaatcactatcatcatcatcatcaggatcaggtccaaatggacct
agcagtagttctccttatccttcttcttcttctccttcttcttcttcttccagatcggag
gatccacgatctgccgttgcaattcaatcagaatttaatcggagagcttccaagattggt
ttcggaattcatcaaacctctcagaaactttccaagctagccaaattggcgaaaaggact
tcggtttttgatgatccaactatggaaattcaagaattaacaagtgttattaagcaagat
attactgcacttaactctgcggttgtggatcttcaattagtcagcaattcaagaaatgag
agtggaaatgtttctaccgacacaactagccattcaactaccgttgtcgatgatctaaag
actcgattgatgagtactaccaaagagtttaaagatgttctcacaatgcgaactgagaac
ttgaaagtgcatgagaatagaagacaattgttttcggcaaatgcttctaaggattctgca
aatcctttcatccgtcaacgtccgttagctacaaaatcggctgctagttcttctaatgcc
cctgcacctccatgggctagtgggaagcaggtggatggagagagtcaaccattgctgcaa
cagcaacagcagcagcagcagatagttccagtgcagcaggacagttacatgcaaagcaga
gctgaagctcttcaaaatgttgagtccactattcatgagctcagcaacatcttcaatcaa
ctagcaacacttgtctcccagcaaggggaggttgccatcaggattgatgagaacatggat
gatacattggcaaatgtagagggggcacaaggggcattgttgaagtatttgaatagcata
tcgtctaataggtggctaatgatcaagattttctttgtattgatgtttttccttatggtt
ttcttattttttgtggcatag
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