Trifolium pratense (red clover): 123893613
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Entry
123893613 CDS
T08949
Name
(RefSeq) LOW QUALITY PROTEIN: rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
123893613
Enzymes [BR:
tpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
123893613
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
123893613
NCBI-ProteinID:
XP_045799335
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Position
LG7:2714634..2720191
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AA seq
652 aa
AA seq
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MISRFLAHRKKKKEERFTMSAPGVQLHIQQHHVVMDNGIVQVTLSNPGGIVTGIRYNGVD
NLLEILNKETNRGYWDLVWSAPGVKGYFDVINGTCFEVIVQNEEQVELSFKRMWDHSLEG
KFVPLNIDKRFILLRGSSGFYSYGIYEHLHGWPDFDMSEXRITFKLRKDKFQYMAMADDR
RRIMPFPEDRLPGRCQPLAYQEAVLLVNPKNPQLKGEVDDKYQYSCKNIDNRVHGWISFN
PPVGFWQITPSDEFRSGGPFKQNLTSHVGPTTLAMFLSGHYAGQDLVPKIRGGEPWKKVF
GPVYIYLNSGPTGDDPLFLWEDAKIKMMNEVQSWPYLFPASEDFLKPHQRGNVSGRLLVL
DRYISTDLISANGAYVGLAPPGDAGSWQRECKDYQFWTRADVNGFFTISNVRPGDYNLFA
WVPGFVGDYRFGDSVKITSGSCIELGEIVFEPPRDGPTLWEIGIPDRSGAEFYAPDPNPQ
YINKVLINHPDRFRQYGLWERYSELYPDADLVYTIGVSDYRKDWFYAQVPRKKVDNTHEG
TTWQIKFELGGVIQGTVYKLRVAIASATLAELQIRVNDPNARRPVFTTGLIGRENTVARL
GIHGLYWLYHVNISSSLFIDGTNTIYFTQPRCTSPFQGFMYDYIRLEGPPCS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcgatttcttgctcatagaaagaaaaagaaagaggaaagattcaccatgtcc
gctccaggtgtacagttacacatccaacaacaccatgtggtgatggataatggcatagtc
caagttacattatcaaatccaggtggaattgtcaccggaatccgatataatggcgttgac
aatttgcttgaaattctcaataaggagactaatagagggtattgggatcttgtttggagt
gcaccaggagtcaaaggatattttgatgtgattaatggaacatgttttgaagttatagtt
caaaatgaggaacaggtggagctttcattcaagagaatgtgggatcattctcttgaggga
aagtttgtccccttaaacattgacaaaagattcattctgctccgtggttcatcaggcttc
tactcttatggaatttatgagcacttacacggatggccagattttgatatgagtgaancg
aggatcactttcaagcttagaaaagacaagtttcagtacatggctatggcagacgatagg
cgaaggattatgccttttccggaggatcgattaccaggaagatgccaacccttggcctac
caagaagcggtcctactagtcaatcctaagaatccacaattgaaaggagaggtggatgac
aagtatcaatattcatgtaagaacatagacaatcgagtccacgggtggatatctttcaac
ccacctgtaggattctggcagatcacacctagtgatgagtttcgttctggtggacccttc
aagcagaatttgacctcgcatgtaggaccgaccacacttgccatgtttcttagtggtcac
tatgccggacaagatttggtacccaaaatcagaggtggtgaaccgtggaagaaggttttt
ggtcctgtatatatttatctcaattctggaccaactggtgatgacccactctttttatgg
gaggatgcaaaaataaagatgatgaatgaagttcaaagttggccatatttattccccgct
tctgaggattttttaaaaccacatcaacgaggcaacgtcagtggcagattacttgtctta
gacaggtacatcagcactgatttaatatcagcaaatggcgcttatgttggtctggctcca
ccgggagatgcagggtcatggcaaagagaatgcaaggactatcaattctggaccagagca
gatgtgaatggattttttacgattagcaatgtacgtccaggtgactacaacctttttgcc
tgggtacctggttttgttggagactacagatttggtgattctgtgaagataacctcaggt
tcttgcattgaattgggggaaattgtatttgaacctccaagggatggccccacattgtgg
gaaataggtattcctgatagatccggtgcagaattttatgctcctgatcccaatccacag
tatataaataaggttcttatcaaccatccagacaggttcaggcagtatggattgtgggaa
agatattcagagttatatccggatgcagatttggtttacacaattggtgttagtgactat
aggaaggattggttttacgctcaggttcccagaaaaaaagtggataacactcatgaagga
acaacttggcaaatcaagtttgaactcggtggtgttattcaaggaactgtatataaactg
agagttgcaattgcatctgcaacattagctgaattgcagattcgagtcaatgaccccaat
gcaaggcgtcctgtatttaccaccggattaataggaagggaaaacacagttgcaagacta
ggaattcatggactctattggctgtaccatgtgaatatatcaagttctctttttattgat
ggcacaaatactatatattttacacagccaagatgcaccagtcctttccagggtttcatg
tatgactatattcgtttggaaggcccaccttgttcttaa
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