Trifolium pratense (red clover): 123893615
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Entry
123893615 CDS
T08949
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
123893615
Enzymes [BR:
tpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
123893615
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
123893615
NCBI-ProteinID:
XP_045799338
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Position
LG7:2721061..2725844
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AA seq
646 aa
AA seq
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MPPLGVQLNIQDHHVVMDNGILKVTLSNPEGIVTGIEYNGIDNLLEVLNEESNRGYWDLV
WSSPTSTGTTGIFDVIKGSTFKVILEDEDQVEISFTRNWDASMEGKMVPLNIDKRFIMLR
GSSGFYSYAIYEHLEDWPAFNLDETRIAFKLRKDKFHYMAMADNRQRNMPLPDDRIPPRG
QALAYPEAVLLVNPIEPELKGEVDDKYQYSCDNKDSQVHGWICMDPAVGFWLITPSNEFR
SGGPVKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFKTGEAWKKVFGPVFIYVNSPYYGAD
PIKLWDDAKLQMLMEVQSWPYSFPESDDFPKWDERGNVSGRLLVKERYIDDDDYLSAKCA
YIGLATPGDVGSWQRECKNYQFWTQADDDGYFSISNVRAGDYNVYAWVPGFIGDYKYDVL
ISITEGCDIDIGDLVYEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINKLYVNHPDKFR
QYGIWERYAELYPDKDLVYTIGVSDYTKDWFYAQVTRKKDDNTYQGTTWQIKFKLDNVNK
KSIYKLRVALASATYSELQVRVNDPKANRPLFSSGLIGKDNSIARHGIHGLYWLYNVNIP
GNLLVEGDNNTIFLTQSRGNGPFQAIMYDYIRLEAPPTTSSFNNKI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgctaggggtgcaactcaacattcaagatcatcatgtggtgatggacaatggc
atactcaaagtcactttatcaaatcctgagggaattgtcactggaatagagtataatggc
attgacaacttgcttgaagtgttgaatgaagaatctaatagagggtattgggaccttgtt
tggagctcaccaacaagtacaggaaccactggaatatttgatgtgataaaggggagcaca
ttcaaagttatattggaagatgaggatcaagttgagatatccttcaccaggaattgggat
gcctccatggagggcaagatggttcctttaaatattgataaaaggttcataatgcttcgt
ggttcatccggcttctactcatatgcaatttatgaacacttggaggactggcctgctttc
aatcttgacgaaacaagaattgctttcaagcttagaaaagacaaattccattatatggca
atggcagataatagacagaggaatatgcctcttccggatgacagaataccaccaagaggc
caagcacttgcctatccagaagcagttctacttgtcaatcctatagaaccagaacttaaa
ggagaggtggatgataagtatcaatattcatgtgataacaaagatagccaagttcatgga
tggatttgcatggatcctgcagttggattctggcttattacacctagcaatgaatttcgt
tcgggtggacccgtcaaacaaaacttaacttcccacgtgggacctaccacgcttgccgtt
tttctcagtgctcattatagtggagaagatttagtgcctaagttcaaaaccggtgaggca
tggaaaaaagtttttggtccagtttttatctatgtcaattctccatattatggtgctgat
ccaattaagctatgggatgacgctaaacttcagatgttaatggaagttcaaagttggccc
tacagttttcccgaatcagatgatttcccgaaatgggatgaacgtggtaatgttagtggc
agactattggttaaagagaggtatatagatgatgacgactacttatcagcaaaatgtgct
tatattggcttggctacaccaggagatgtgggatcttggcaaagagaatgcaagaattat
cagttttggacgcaagcagacgatgatggttatttctccatcagcaatgtacgtgccggc
gactataatgtttatgcatgggtacctggttttattggtgactataaatatgatgtactg
attagcataacagaaggttgtgacatagatatcggtgatcttgtttatgagccaccaaga
gatggtccaacattgtgggaaataggcatccctgatcgttcagctgccgaattctatgtt
cctgatccaaatcccaaatatatcaacaaactttatgttaatcatcctgacaaatttagg
caatatgggatatgggagagatatgcagaactataccctgacaaagatttggtctacaca
attggtgttagtgactacacaaaagattggttctatgctcaagttactaggaagaaagat
gataatacatatcaaggaacaacttggcaaatcaagtttaagcttgataatgtgaacaaa
aaaagtatctataaacttcgagttgctttggcatcagctacatattcagaacttcaggta
cgagtaaatgatcccaaagcaaatcgtcctttattttcaagtggattgataggaaaggat
aattcaattgctagacatggaattcatggactttattggctttacaatgtgaatatacct
ggtaatttacttgttgaaggagataataataccatctttttgacacaatcaagaggcaat
ggtccatttcaagccattatgtatgattatattcgtttggaagctccaccaactacttct
agtttcaataacaaaatttga
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