Trifolium pratense (red clover): 123893616
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Entry
123893616 CDS
T08949
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
123893616
Enzymes [BR:
tpra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
123893616
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
CarboxypepD_reg
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
123893616
NCBI-ProteinID:
XP_045799339
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Position
LG7:2728697..2733614
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AA seq
674 aa
AA seq
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MNLVNLFMFFMLQFILFLGCSSIDSGVRLDIQEKHVIMDNGIVQVNLSNPEGFVIGIQYN
GLDNLLEVLNPEFDRGYWDIVWDQGGKNRTKKGAKGKGRLDRMDTTNLTVIVKNEEQVEL
SFTRTWNFSLEGKLAPLNIDKRFIMLRGSSGFYTYAIYDHLKEWPAFDLDNTRVAFKPRK
DKFNYMVIADDRQRFMPLPDDRLPGRGQVLAYPEAVRLVDPVEPEFKGEVDDKYEYSIES
RSNYVHGWIFINSSESNGIWLITPSYEFRSAGPLKQYLASHAGPTMLSVFHSTHYSGEDL
IMKFGPNESWKKVFGPIFIYLNSMSDGLSPIRLWEDAKHQMVNEIESWPYTFPASKDFLS
SAQRGKVEGRLLVRDRYISDAFVPVSGAYVGLAPLGDVGSWQREYKGYQFWTITDDEGYF
SIINIRPGDYNLYSWVTGFIGDYQYNNAINITSGCNINVGELVYEPPRDGPTLWEIGIPD
RTAAEFYVPDPNPLYVNKLYVNHTDRYRQYGLWERYADLYPNEDLVYTVGISDYKKDWFF
AQVTRKKDNNTYQGTTWQINFNLNHVNTNGTYKLRLALASVHSADLQIRINNSNATSPPL
FSSGIIGKENTIARHGIHGFYWLFNIDVEGTILVKGNNTIFLTQANNNGPFVGILYDYIR
LEGPPDINFIKDRN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggttaatcttttcatgttttttatgttgcaattcatcttgtttctaggttgt
agtagcattgattcaggggtgcgattggatattcaagaaaaacatgtgataatggataat
ggcatagtacaagtgaatttatcaaacccagaaggatttgtcattggaattcaatataat
ggacttgataatttgcttgaagttcttaatcccgaatttgacagagggtattgggatatt
gtatgggaccaaggtggaaaaaatagaacaaaaaaaggtgcaaagggaaagggtagactc
gacaggatggacaccacaaatttgacggtgatagtgaaaaatgaagaacaagtagaatta
tctttcactagaacatggaatttctctcttgaaggaaagctagcaccactcaatattgat
aaaaggtttataatgcttcgtggttcctctggattttatacatatgcaatttatgaccat
ttgaaggaatggcctgcatttgatcttgacaatactagagttgcattcaaacctaggaaa
gacaagttcaattacatggttatagcggacgacagacaaagatttatgccgctgcctgat
gatcgattaccgggaagaggccaagttttggcatatccggaggctgtccgccttgtcgat
ccagttgagccggagtttaaaggagaggtggatgataaatatgagtactcaattgagagt
cgaagcaactatgttcatggttggattttcattaattcatcggaatctaatggaatatgg
ttaattacgccaagttatgagtttagatctgctggacccttaaaacaatatcttgcttcc
catgcggggccaaccatgctctccgtatttcatagcacacattattcaggagaagatctg
ataatgaaatttggacccaatgaatcgtggaagaaagtttttgggcctatattcatatac
cttaattccatgtctgatgggcttagcccaatcaggctttgggaggacgccaaacatcag
atggtgaatgaaattgaaagctggccatatacatttcctgcttcaaaggactttctctca
tctgcccaacgaggtaaagttgaaggtagattgcttgtccgtgataggtacatcagtgat
gcattcgtcccagtgagtggtgcttatgttggattagcacccctaggagatgttggatct
tggcaaagagaatacaagggttatcaattttggaccattactgatgatgaaggctatttc
tcaataattaacatacgtcctggtgactataatctttattcatgggtcactggattcatt
ggtgattatcaatataacaatgccattaacataacctcaggttgtaatattaatgtgggt
gagcttgtttatgagccaccaagagatggtccaacattgtgggaaatcggcattcctgat
cgcacagctgccgagttctatgttcctgatccaaatcccttgtacgttaacaaactttat
gtcaaccatacagacagatataggcaatatggcttgtgggagagatatgctgatttgtat
ccaaatgaagacttagtttacactgttggcattagtgattacaaaaaagactggtttttt
gctcaagttactaggaaaaaggacaacaatacttaccaaggaactacatggcaaattaat
ttcaatcttaatcatgtgaataccaatggaacctacaaattgcgactagctctagcatct
gtacattctgctgatttacagattcggataaacaattcaaatgcaacaagtccaccttta
ttttcaagtggaattattggaaaggagaatactatagctagacatggaattcatggattc
tactggttattcaacattgatgtagaaggcactattcttgtgaaaggaaacaatacaatc
tttctaacacaagctaacaacaatggtccttttgtaggaattttgtatgattatattcgt
ttagaaggaccccctgatattaattttattaaagatcgaaactag
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