Trifolium pratense (red clover): 123893780
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Entry
123893780 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123893780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123893780
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123893780
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123893780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
FAIM1
zf-C3HC4_2
ZnF_RZ-type
Baculo_p48
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
123893780
NCBI-ProteinID:
XP_045799536
LinkDB
All DBs
Position
LG7:complement(18931761..18936232)
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AA seq
303 aa
AA seq
DB search
MALSNPLFDAIRSNSDVDPPQIEESIDVGELINDPAQTAPKPAEILSSVRDLLDCPVCLN
PMYPPIHQCSNGHTICTDCKPRVHNRCPTCRHELGNIRCLALEKVASSFALPCKYKAFGC
IGIYPYYDKSEHESQCSYRPYNCPYAGSQCSIVGDISYLVNHLKEDHKVDMHNGSTFNHR
YVKSNPHEVENATWMLTVFSCYGQYFCLHFETFQLGAAPVYIAFLRFMGDDSEAKKYSYS
LEVGGNGRKMVWQGVPRSIRESHSNIRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIW
KEQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcattgagtaatccactctttgatgctatacggagtaacagtgatgttgatcctcct
caaattgaagagtcaatagatgttggtgaattgattaatgatcctgcacaaactgctcct
aaacctgctgaaattttaagcagtgttcgtgatcttttagattgtcctgtatgcctgaat
cccatgtaccctccaattcatcagtgttcaaacggtcatactatatgtacagattgcaaa
cccagggtacataaccggtgccctacttgtaggcatgagctgggaaatattagatgtcta
gcattggagaaggtggcttcatcttttgcactcccttgtaaatacaaagcttttgggtgc
atcggaatatatccatactacgacaagtcagaacatgaatctcaatgttcatatagacct
tataactgtccatatgctggttcccaatgctctattgtgggtgatatatcctatctggtg
aaccatttgaaagaagatcacaaagtggacatgcacaatggtagcacttttaaccatcgt
tatgtcaaatcaaatcctcatgaagtagaaaatgccacatggatgttaacggttttcagc
tgttacggtcagtacttttgtctacattttgaaacttttcaacttggagctgctcctgtc
tacatagcctttttgcggtttatgggtgatgatagcgaagcaaaaaagtatagctacagt
cttgaggtaggcggaaatgggaggaagatggtttggcaaggagtgccaagaagcatcagg
gaaagccactccaatattcgggacagttttgatggactcattattcagaggaatatggca
ctcttcttttcaggtggtgaccggaaagagttgaagctaagggttaccggtaggatctgg
aaagagcaatga
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