Trifolium pratense (red clover): 123893849
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Entry
123893849 CDS
T08949
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2-like
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123893849
03036 Chromosome and associated proteins [BR:
tpra03036
]
123893849
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123893849
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123893849
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
123893849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
TRAF3_RING
zf-RING_10
PHDvar_NSD
zf-RING_6
GerD
Motif
Other DBs
NCBI-GeneID:
123893849
NCBI-ProteinID:
XP_045799621
LinkDB
All DBs
Position
LG7:complement(38290513..38297647)
Genome browser
AA seq
614 aa
AA seq
DB search
MTGHSITSRSNQTMQLPCDYDGHCMVCKQNPPNIEISPCRTCATPWHILCLPVPPTTFFD
WDCPDCCQPQQNNHAPPLAENLISAIQAIQSDISLTEVEKAIKRQKLVGGSSKPHLDKNK
SNGMLDIFDGTLNCSFCMQLLERPITTPCGHNFCLRCFEKWIGKGKHVCAKCRSTIPSKI
ASHPRINSQLAIAIRLAKLARSEGIRESIDIATKNAPCFMHNDDRPNTAFTTERAKKAGK
ANACCGKIFVTIPSDHFGPILAENDPIRNRGVVVGDTWSDRMECRQWGAHFPHVAGIAGQ
SNHGSQSVALSGGYIDDEDHGEWFLYTGSGGRDLSGNKRINKQHSFDQTFDYMNQALRIS
CLKGYPVRVVRSHKEKCSFYAPEVGVRYDGIYRIEKCWRKNGIHGHKVCRYLFVRCDNEP
APWTSDLYGDRPRPLPKIKELKDAIDITERKGVPSWDYDEEKGCWLWKKPPPKSKKKATI
VNPVDGTIIRDFKPKTKKVSLKLKERILKEFGCNICRKVLVLPLTTPCAHNFCKTCLEDA
FSGQSYIKKRIYENGRTLRSLKNIIRCPSCSNDIADFLQNPQVNREMMDVIESLQRQTEQ
MDGNFEELSDDNAA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgactggccactcaattacatcacgatcgaaccaaacgatgcagcttccctgtgactat
gatggccactgcatggtctgtaagcaaaatcctcccaacattgaaatttcaccatgtcgg
acatgcgccactccctggcacatcctttgtcttccagtccctcccaccactttctttgat
tgggactgcccagactgttgtcaaccccaacaaaacaaccatgctccgcctctagccgaa
aaccttatttctgccattcaagctattcaatctgatatttcactcactgaggtagaaaag
gcaataaagcgccaaaaacttgtaggtggatcatctaaaccacatttagataagaataaa
agtaatggcatgcttgatatctttgatggaaccttaaattgctccttctgtatgcaatta
ctagagagacccatcacgacgccttgtgggcataacttttgccttaggtgttttgagaag
tggattggaaaaggaaaacatgtgtgtgctaaatgtaggagcacaattccatcaaagatt
gctagtcatcctcgtattaactcacagctagcgatcgcaattcgattagcaaaattggcg
agatcagagggaataagagaaagcatagacattgcaactaagaatgcaccttgctttatg
cacaatgatgaccgtcctaacacagcattcactacagagcgagcaaagaaagctgggaag
gcaaatgcatgttgtggtaaaatatttgtgacaattccatccgatcattttggaccgatc
cttgcagagaatgatccaataaggaatcgtggtgttgttgtgggtgatacatggtcagat
aggatggaatgtagacaatggggtgctcattttcctcacgttgctggaattgctggtcag
agtaatcacggctcacaatctgttgctctttcgggaggttacattgatgatgaagatcat
ggtgaatggttcctttacactggaagtggtggaagagaccttagtggaaacaagcgcata
aacaaacaacattcctttgatcaaacatttgattacatgaatcaggcgttgagaattagt
tgccttaaagggtatcctgttcgagttgttaggtctcacaaggagaaatgttcgttttat
gcaccggaagttggagtgcgatacgatggtatttatagaatagagaaatgttggcgtaag
aatggaatacatggtcacaaagtttgtagatacttatttgtgagatgtgacaatgagcca
gccccatggacaagtgatttatatggagatcgcccccgtccattgcctaaaattaaagag
ttgaaggatgcaattgatataactgaaaggaagggtgttccgtcatgggactatgatgag
gaaaaaggttgttggttgtggaagaaacctccaccaaaaagtaagaaaaaggcgaccatt
gtgaaccctgttgatggaacaataatcagagattttaagccaaaaacaaagaaagtgtct
ttaaaactaaaagagaggattttgaaagaatttggttgcaatatatgtcgcaaggtgtta
gttttgcctcttactactccttgtgctcacaacttctgcaaaacatgcttggaggatgcc
ttttctggccaaagttatatcaagaagagaatttatgaaaatggacgcactttgcgatca
ttgaagaacattataagatgcccttcgtgttctaatgatattgctgattttcttcaaaat
ccacaggttaacagagaaatgatggatgttatagaatcacttcagcggcagactgaacag
atggatggaaattttgaagaattaagtgatgataatgctgcatga
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