Trifolium pratense (red clover): 123893960
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Entry
123893960 CDS
T08949
Name
(RefSeq) COP1-interactive protein 1-like isoform X1
Organism
tpra
Trifolium pratense (red clover)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frigida
Tropomyosin
Crescentin
APG6_N
Motif
Other DBs
NCBI-GeneID:
123893960
NCBI-ProteinID:
XP_045799761
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Position
LG7:complement(51970346..51976793)
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AA seq
1453 aa
AA seq
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MMDVEGTDKPNFGGSDDDGNLFVSCEDFEFEDDDDDDDDDDHIPLSPRFPRISSLGTCSN
KGGASVEKKPTCPRPVKRLFDNTNCNSLHISVKKSKVLPSDDQHKDEDDIRMSGIIKRLG
KSTEKPFSSLKKDIASLEELFEDCKRKNQVEEKRWKSIQREIEECSRELENKKNQVGCVG
RISEAHNKLQEKIEKCMEDFVAKEVQLYLMEELIEECKQEFKTKEIELIHVKGNISKEIE
PGQIIDDIDEDRGSKEEELKALSQKIAESTMELEAKEKNHDAIKKVIAGQTEKLLLERKK
LLQVISIRKNEQAQMKDFELMKKRLESHVEELQSKEKQCKRREEEYESKEKHFEGRVKEL
ESREKELEGRLKEHESNEREFKGQVNDLVSKQNNFDSRMKELESKEKQCKRQVEEYESKE
KHFEGRVKELESREKELEGRLKEHESNEREYKGQVNDLASKQNHSDNRMKELESREKQHE
DRMKVLESKEREYEGQLKELESKKYHFESQVKEVESKANQLVGQMKELESKESKFECEMK
ELELTKKQFEIRMKELESKEKQLEGRLEEHKSKEKEFEHQVKELESRKKHFEREVEELKS
KLSPLKEQVEELDSKEKQLDCKMNELDFKKKLFESQVKELDSKDNQLVCQMKEFKLKERE
FEGQVKELVSKQNHFECRMKELESKEKQHEGLVKEHEAKDRELEGQVKDLKSKKEKFESQ
VMELESKNNQLVGRMKELESKEKEFEGQTKELVLKQKLFESQMTELESKEKRLVGRLEEH
ESNVREFKAQVEELETEKMNFESRMKELESKEKQHEGRMKMLESKEREYEGQLKELESKK
YHFESQLKEVESKDNQLVGQMKELESKTKHLESKRVEFKSKLRPLQGQIKELESKKERLD
VQAKELESKQKLFQSQMKELESKENQLVSQMKEFESKERQFEDQMKEQVLKQKHFESRMK
ELESKEKQHEGRVKEHESKVREFEGQMKELESKQKYFESQMKGFDSKEEQHECRVKEHES
KAREFEGQVKELESKKKHFESQVEELKSKERQLKGQVMELESKEKQFDGRVKELESKENE
FEGRVKELESEKKHFNSQVMELKSKGKQFEGQIKEFQAKEEKFKGKVKELESKELEFECQ
VKELESKKKLFESQVEDFKLKEKQFEGQLREPESRKKYINEEKESVASDQLSRIVGGTSL
QLDTSEKIDGVESHYNGSLVNMLDSPDPSRAVLDMIQNPVIPMCKMGDNAVIIDDCHIFL
LEQLMRTSPNIEPCVREEALKLALDLKAYMKENTENSLVVLGFLLLLSIYGLLDSFNEDE
VLELFAFVAQHKIAVELFGTLGFTNKVSDFVKNLTTRKQFVAAVRFSCAYSLADKNQLVV
MLREHVQNAKLICDSSCEKTNAIEIKDKAKDQEIASLGTVLQCILDCDLQSEDMLLDKDI
KYRILELKASKGI
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgttgagggtactgataagccaaattttggcggtagtgatgatgatggaaac
ttatttgtttcatgtgaagactttgaatttgaagatgatgacgatgacgacgacgatgat
gatcatattcctttgtcaccaaggtttccccggatttcgagtttgggaacatgcagtaat
aagggcggtgcttcagttgagaagaagcctacttgtcctaggccagttaaaaggctgttt
gataataccaattgcaactccttgcatatttctgttaagaaatcaaaggtgttaccatct
gatgatcaacataaagatgaagatgatattcgtatgtcgggtataattaaaaggctggga
aaatcaactgagaaaccattttcctcgctgaagaaagacattgcatcgttagaagaatta
ttcgaggattgcaaaaggaagaatcaagtagaagagaagagatggaagtccatacagaga
gagattgaggagtgttccagagagcttgaaaataagaaaaatcaagttggttgtgttgga
agaattagcgaagctcacaacaaactgcaggagaaaattgaaaaatgtatggaggatttt
gtagcaaaggaagtacagctctatttgatggaggaattgattgaagagtgcaagcaagag
tttaagacaaaagagatagaacttattcatgtcaagggtaatatttcaaaagaaatagaa
cctggtcaaatcattgatgacattgatgaggaccgtggaagtaaggaagaggaactcaag
gctctttcccaaaaaattgctgaatctactatggaacttgaggccaaagagaaaaatcac
gatgcaataaaaaaagtaattgccggacaaacagaaaaattattgttggaaaggaagaag
ttactacaggtaatatcaataaggaagaatgaacaagctcaaatgaaggactttgagtta
atgaagaagcgattggaaagtcatgttgaggaacttcagtcaaaagagaagcaatgtaag
cgacgggaggaggagtatgagtcaaaggagaagcactttgaaggacgagtaaaggagttg
gaatcaagagagaaggagcttgaaggccgattgaaggagcatgaatcgaatgagagagaa
tttaaaggccaagtgaatgatttggtatcaaaacagaataatttcgatagccgaatgaag
gaacttgagtcaaaagagaagcaatgtaagcgacaggtggaggagtatgagtcgaaggag
aagcactttgaaggacgagtgaaggagttggaatcaagagagaaggagcttgaaggccga
ttgaaggagcatgaatcgaatgagagagaatataaaggccaagtgaatgatttggcatca
aaacagaatcattccgataaccgaatgaaggagctagagtcaagagagaagcaacatgaa
gaccgaatgaaagtgcttgaatcaaaagaaagagaatatgaaggccaattgaaggagctg
gaatctaaaaagtaccattttgagagccaagtcaaggaggtagaatcaaaagctaaccaa
cttgtaggccaaatgaaggagcttgaatcaaaagagagcaaatttgaatgcgaaatgaag
gagctggaattgacaaagaagcaatttgaaatccgaatgaaggagcttgaatccaaagaa
aagcaacttgaaggccgcttggaggagcataaatcaaaagagaaggaatttgagcaccaa
gtaaaggagttggaatctagaaagaagcattttgaaagagaggtggaggagctcaaatca
aaattgagtccattgaaagaacaagttgaggaacttgactctaaagagaagcaacttgat
tgcaaaatgaacgagctggattttaaaaagaagttgtttgaaagtcaagtgaaggagtta
gattcaaaagataaccaacttgtatgccaaatgaaggagtttaaattaaaagagagggaa
tttgaaggccaagtgaaggagctggtatcaaaacagaaccattttgaatgccgaatgaag
gagcttgagtcaaaagagaagcaacatgaaggcctagtgaaggagcatgaagcaaaagat
agagaattggaaggccaagtgaaggacctgaaatctaaaaaggagaagtttgaaagccaa
gtgatggagttagagtcaaaaaataaccaacttgtaggccgaatgaaggagttagaatca
aaagagaaagaatttgaaggccaaacaaaggagctggtattgaaacagaaactttttgaa
agccaaatgacggagcttgagtcgaaagagaagcgacttgtaggccgattggaggagcat
gaatccaatgtgagggaatttaaagcccaagtggaggagctggaaactgaaaagatgaat
tttgaaagccggatgaaggagcttgagtcaaaagagaagcaacatgaaggccgaatgaaa
atgcttgaatcaaaagaaagagaatatgaaggccaattgaaggagctggaatctaaaaag
tatcattttgagagccaactcaaggaggtagaatcaaaagataaccaacttgtcggccaa
atgaaggagctggaatctaaaacaaaacatttagaaagcaagagggtggagttcaaatca
aaattgaggccattgcaaggacaaattaaggaacttgaatccaaaaaggagcgacttgat
gtacaagcgaaggagctagaatcaaaacagaaattgtttcaaagccaaatgaaggagtta
gagtcaaaagagaaccaacttgtaagccaaatgaaagagtttgaatcaaaagagaggcaa
tttgaagaccaaatgaaggagcaggtactgaaacaaaagcattttgaaagccgaatgaag
gagcttgagtcaaaagagaagcaacatgaaggccgagtgaaggagcatgaatcaaaagtg
agagaatttgaaggccaaatgaaggagctggagtctaaacagaagtatttcgaaagccaa
atgaaggggtttgattcaaaagaggagcaacatgaatgccgagtgaaggagcatgaatcc
aaagcgagagaattcgaaggccaagtgaaggagctggaatctaaaaagaagcattttgaa
agccaagtggaggagctcaagtcaaaagagaggcaattgaaaggacaagttatggaactg
gagtccaaagagaagcaatttgatggtcgggtgaaggagttggaatcaaaagagaatgaa
tttgaaggccgggtgaaggagctagaatcagaaaagaagcatttcaacagtcaagtgatg
gagctcaaatcaaaaggaaagcagtttgaaggacagataaaggaatttcaggcaaaagag
gagaaatttaaagggaaagttaaggagcttgaatcaaaggagctggaattcgaatgtcaa
gttaaggagctcgaatcaaaaaagaagctttttgaaagccaagttgaggattttaaatta
aaagagaagcagtttgaaggacaactgagggagcctgagtcaaggaagaaatatattaac
gaggaaaaagaatcggttgcatctgatcaattaagtcgtatcgttggtggaacaagtttg
cagttggatacaagtgagaaaattgatggagttgagtcacattacaatggtagtttagtt
aatatgctagactcaccagatccttcaagagctgttttggatatgatacagaaccccgtt
attccaatgtgtaagatgggagataatgctgtgattattgatgattgccacatctttctg
ctagaacaactgatgagaacctctccaaatattgaaccttgtgtaagagaagaagcgttg
aagctagcacttgatttgaaagcttacatgaaagaaaatactgaaaattctttggttgtt
ctgggttttctactgcttttgtcgatttatggattgcttgattctttcaatgaagatgaa
gttttggagctttttgcatttgttgctcagcacaagattgccgtggaactgtttggaacc
ctgggttttacaaataaagtttctgattttgttaaaaatcttaccacgaggaagcaattt
gttgcagctgttagattcagttgtgcatatagcttggctgacaagaatcaattagttgtt
atgttgcgagaacacgtccagaatgccaaactgatttgtgacagcagttgtgagaaaacc
aacgctatagaaatcaaggataaggccaaagatcaagaaattgctagtctgggaactgtt
ctacaatgcattttggattgcgacctacaatctgaggatatgctgcttgataaggatatt
aaatatcgcattcttgagctcaaagcaagtaaaggcatttag
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