Trifolium pratense (red clover): 123894052
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Entry
123894052 CDS
T08949
Name
(RefSeq) DNA topoisomerase 6 subunit B-like isoform X1
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpra03032
]
123894052
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
123894052
DNA replication proteins [BR:
tpra03032
]
Prokaryotic type
DNA Topoisomerases
123894052
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c_3
HATPase_c
Peptidase_S3
Motif
Other DBs
NCBI-GeneID:
123894052
NCBI-ProteinID:
XP_045799881
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Position
LG7:complement(55727623..55740724)
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AA seq
711 aa
AA seq
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MDASSESPIESKKSNSKTPRKPKETVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELV
ENALDSAESISELPVVEITIEEIVKSKFNSMIGLIDRERVDAALYDDFETEKAREKRLAK
EARAQELQAKNASLGKKVKDTPASKGIKGRGEASFYRVTCKDNGKGMPHDDIPNMFGRVL
SGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMKKQNYSTFCRLDIDIHKNIPH
VHLHEKRENKQHWHGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFQFKFVSDAPDK
NVTVRFSRRTDVMPPIPLETKHHPSSVDLLLIKRLIAETSKQNLLQFLQHEFVNISKPHA
ERLIGEMGPDFSSKMVVKSLTSQQLVRIHQLFRQAKFDDPSGHCLSPAGEYNLRLGIIKE
LHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGLNIFRFANRIPLLFEQGADVVTR
TALKRINWNNYKINQVQDKIGVFVSIVSTKIPFKGTGKEYIGDDITEIASAVKSAIQQCC
VQLKSKIMKRIQAREQQERKRNLTRYIPDASSAFYNILKVMPLHPSKKSRYGDHDVDLLE
KVSDNLITKETFIEKLSKHVEQVDYEMGLEFATQSGVSEEPRETIYIKPLEAENKKIDLH
SPFFVYRVFNISKLNLYHSKQRTFIVSFFHSQEIYNIQSKIYIILEVDSKI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaagtagtgaaagtccaattgaatccaagaaatccaactccaaaacccctcgc
aaaccaaaagaaaccgttctcaaacagaaatctccagctgaattcttcgcagagaacaaa
aatatcgcaggatttgataatccgggaaaatctctgtatactactgttagagaattagtg
gagaatgcacttgactccgccgaatcaatatcggagcttccagtagttgaaataactatt
gaggagatagttaaaagcaaattcaattctatgattggtcttattgaccgtgaacgtgtt
gatgcagcactttatgatgattttgaaaccgaaaaggctcgtgagaaacgattagcaaaa
gaagctcgtgctcaagaattacaagcaaagaatgcttctcttggaaagaaagtgaaagat
actccggcttcaaagggtatcaagggtcgaggcgaggcttcattttacagagttacatgc
aaggataatggaaaaggaatgccacacgatgacatcccaaatatgtttggtcgagttctc
tctgggacaaagtatggcttgaagcagactcgtggaaagtttggtcttggcgcgaagatg
gcactaatatggtccaaaatgagtaccggacttcctattgaaatctcttcatcaatgaaa
aagcaaaattatagtacattctgcaggctggatattgacatccataagaatattcctcat
gtacatttacatgaaaaacgggagaacaaacaacattggcatggagctgaaattcaagtt
gtcatagagggaaactggacaacttaccgttcaaaaatattgcattacatgcgacaaatg
gctgttattaccccttatgcacagtttcagtttaagtttgtgtcagatgcacccgacaag
aatgtcactgtaaggttttctcgcagaacagatgtaatgccacccattcctttggagaca
aaacatcatccatcctctgttgatttgctgctaattaaacggcttattgccgaaacctca
aagcaaaaccttttgcagtttcttcagcacgaatttgtaaatatcagtaaaccccatgct
gaaagattgataggagaaatgggtccggattttagctcaaaaatggttgtgaagtctcta
acttcacagcaattagtacgcattcatcagttgttccgtcaagccaaatttgatgatcct
agtggtcattgtcttagccctgctggcgaatacaatcttcgactaggaatcataaaagag
cttcacccagacatggttgcaacatactcaggcagtgctcaagtttttgaaggccacccg
ttcattgtggaagcaggagtcagtgttggtggaaaagatgtcaagcaaggtttgaatata
tttcgctttgccaatagaattccactactttttgagcaaggtgccgatgttgtcaccagg
actgcgcttaaaagaatcaactggaataattacaagattaaccaagtacaagacaagatt
ggtgtctttgtaagcattgtgagcacaaaaatcccatttaaaggaactggaaaagaatac
attggagatgacataaccgagattgcttctgctgtcaagtctgctattcaacaatgttgt
gtccaattaaaatccaagattatgaaaaggatacaggcccgtgagcagcaggagaggaaa
cgaaatctaaccaggtatattcctgatgctagtagtgcattttacaatattttgaaagtt
atgccattacatccatcaaagaagagtcgttatggggatcatgatgtagatctactagaa
aaagtctccgataatttgattactaaagaaacattcatcgaaaagctttctaaacacgtt
gaacaggtggattatgaaatgggattggagtttgctacacagagcggagtaagcgaagaa
cccagggaaacaatatacataaagccattggaagctgaaaacaagaagattgacttgcac
tctccattttttgtttacagagtctttaatatttcaaagttaaatttatatcacagtaaa
caaaggacatttattgtatcattttttcattcgcaggaaatatataacatacagtcaaaa
atatatatcatacttgaggttgatagcaaaatataa
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