Trifolium pratense (red clover): 123894157
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Entry
123894157 CDS
T08949
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
tpra04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123894157
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
123894157
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123894157
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123894157
03036 Chromosome and associated proteins [BR:
tpra03036
]
123894157
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
123894157
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
123894157
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
123894157
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
123894157
NCBI-ProteinID:
XP_045800020
LinkDB
All DBs
Position
LG7:56527443..56534531
Genome browser
AA seq
517 aa
AA seq
DB search
MNGAEVVAAPAGPPVPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGR
VVLFERTDTKDHGESRRDSERMDYSLGRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKI
RWCQIANGALFLLSTNDKTIKFWKVQEKKVKKIAEMNVDPSKSMGNGSTASSSNSISARP
SLENGGFPDSDRSFNYLSSDFSFPPGGIPSLRLPVVVSSHETSLVARCRRVYAHAHDYHI
NSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCN
TLAYSSSKGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYI
LSRDYMTLKLWDINMDSGPVATYQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATG
SYSNLFRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPSRSLGNSITRVVRRGAENPGVD
ANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtgccgaggttgttgcagctccggcgggtccaccggttcctcttgactggaaa
ttctctcaggtgttcggtgaacgtacggctggtgaagaggttcaagaagtggacataatt
tctgctatcgaatttgacaagtctggtgatcatcttgctactggtgatcgtggtggtcga
gtggttctctttgagaggacagatacaaaagatcatggcgaatctagaagggattcagag
aggatggactattctctcggtaggcatcctgaattccgttacaaaacagagtttcagagt
cacgagcctgagtttgactaccttaagagtttggagatagaagagaaaatcaacaaaatc
agatggtgccaaatagctaatggtgcccttttccttctctcgacaaatgataaaaccatc
aaattttggaaggttcaagaaaagaaggtcaagaaaattgctgagatgaatgtcgaccct
tcgaaatcaatgggaaatggcagtactgctagttcaagtaattcaattagtgctaggcca
agccttgaaaatggaggatttccagattcagatagatcgttcaattatctaagctccgac
ttctcatttccaccgggaggcataccatcactaagattacccgtggtagtaagtagccac
gaaaccagcttggtggctcgttgtcgtagagtttacgcccatgcacacgactatcatatc
aattctatttcaaacaacagcgatggcgaaactttcatatcagccgatgatttgcgaata
aatctttggaatctggaaataagcaatcagagttttaatattgttgatgtaaagcctgca
aacatggaggatctgacagaggttataacatcagcagaattccaccctacacattgtaat
acgttggcatatagcagctcaaagggttcaatccgtctaattgacttgcggcaatcagca
ttatgtgattctcatgccaaactgtttgaggaacaggaggccccaggatcccgatcattt
ttcacagagattattgcttccatatctgacataaagtttgggaaggatgggcgatacata
ctaagtcgtgattacatgactttaaagttatgggacattaatatggattcaggtccggtt
gcaacttaccaggttcatgagtatcttagaccaaagctttgtgatttgtatgaaaacgat
tcaatctttgataagttcgagtgttgtctgagtggtgacggattgcgagtagcaactggt
tcttacagcaatttattccgagtttttggctgtgctcctggaagtaccgaagctacaact
ttggaagccagtaaaaatccaatgaggcgacaagttccgaccccctcaaggccgtctaga
tcattgggaaatagtataacgcgagttgtaagacggggagcagaaaaccctggtgttgat
gcaaacgggaattcgtttgatttcacgacaaagttgttgcacttagcatggcatccatct
gaaaattcgattgcttgtgctgctgcaaatagcttgtacatgtactatgcataa
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