Trifolium pratense (red clover): 123894174 Help Entry 123894174         CDS       T08949                                  Name (RefSeq) protein PAT1 homolog   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism tpra  Trifolium pratense (red clover) Pathway tpra03018   RNA degradation Brite KEGG Orthology (KO) [BR:tpra00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     123894174  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tpra03019]     123894174 Messenger RNA biogenesis [BR:tpra03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      123894174   mRNA degradation factors    5'-3' decay     Decapping complex      123894174 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  123894174 NCBI-ProteinID:  XP_045800048 LinkDB All DBs Position LG7:39936278..39943057 Genome browser AA seq 828 aa AA seqDB search MVDMDGFGGGDDVRGISNKLDQFGDIPIPKEGEVFDATQYAFFGQDACVEEVELGGLEDD DCLPESNEEEFLLNREEVEDVKSLSDIDDLSTDFWKLNKVEIGPQSTAIISERGSRENST AEWTRRNDDLNWFDQNPYDSEGSLDGRRLSSQPYSSLAPLQESNSLYRTYSYPEQPRPQQ QQPYIQHGSSESISNWFDQPFRDSGTQDAKRWSSQPHSSIANVEESKSLYSTSLYPEKPQ ELLHFSNDSILAPNSSFTSFPPPGGRSQQASPSHNTGPLNIPYHAVGAQMALSPQNRSHL SNSALQLGGLNHGSPVGGNMRQYPMGSPLNQRIPNQLVNQAGLYNNGVHPNISSGLAMIN KYDQMLGMMELRDQMPKSAQMGRQNIRFSPQGFDMSNQKFNNGFPRFRSKYMSTEELENI FRLQLAATHTNDPYVDDYYNQGCRAKKDSSDRRHFSPAQIREIPQRASSNEPHAFLQVDA LGRVPFSSIRRPRPLLEVDPPNSSRAGDPEQKISEKPLEQEPMLVSRVTIEDGLCVLLDV DDIDRFLQFNKQLQDGGDHLKRKRQGLLEGLSATLQLVDPLGRNGHTVELAAKDDFVFLR IVSLPKGRKLLARYLQLLFPGGDLMRVVCMAICRHLRFLFGSLPSDPTASETVINLAKVV SNCICEMDLVALSVCLASVVCSSEPPPLRPLGSAAGDGTSLILVSVLQRATQLLTDPHAA SNYTIRNRSLWQASFDEFFALLAKYCFSKYDSIVQAFLAQGASNMAVIGPDFARAISSEI PVDLLRASLPHTDDRQKKILLDFAQRSVVGYNSNSGGNGHQVNSQSSQ NT seq 2487 nt NT seq  +upstreamnt  +downstreamnt atggtcgatatggatggatttggtggtggggatgatgttcgaggaatttctaacaaacta gatcaatttggggatattcctattcctaaagaaggtgaagtttttgatgcgacacaatat gcatttttcggtcaagatgcttgtgtagaagaagttgagttgggagggttagaagatgat gactgtttgcctgagtctaatgaggaggagttccttcttaatagagaagaggttgaggat gtaaaatctctttctgatattgatgatctcagcaccgatttttggaagttgaacaaggtt gaaattggaccacaaagcacagcaattatcagtgaacggggatcaagagaaaattctacg gctgaatggacacgaaggaatgatgatcttaactggtttgaccagaatccttatgatagt gaaggttctctggatggtagaagactgtcatcacagccttattcttctcttgccccttta caagaatcaaattctttgtatagaacttattcatatcctgagcagccaaggccgcaacaa caacaaccctacatccaacatggctcaagtgaatcaatttcaaactggtttgatcagcct tttcgtgattctggaacacaggatgccaaacgatggtcatcacagccacattcctccatt gcaaacgtagaagaatcgaagtccttgtacagtacttctctatatcctgagaaaccacag gagcttcttcatttttctaatgattctattttggcaccaaattcttcatttacttctttt cctccacccggtggtagatctcagcaggcttctccaagtcataatacaggtcccttaaac attccttatcatgctgtaggagctcagatggcactgtctcctcaaaaccgttctcatcta tccaattctgcactacagttgggtggattaaaccatggatcacctgttggtggaaacatg cgccaatatcctatgggttcccctcttaatcaacgaataccgaatcaattggtcaatcag gcaggcctatataataatggagttcatcccaatatttcttctggtttagccatgatcaac aaatatgatcagatgcttgggatgatggaactgagggatcagatgccaaaatctgcccaa atgggtagacagaatatccgattttctcctcagggttttgatatgagtaaccaaaaattc aataatggatttccccgatttaggtctaagtatatgtcgactgaggaacttgagaatata tttagattgcagcttgcagcgacccatactaatgatccatatgtagatgattattataac caaggctgtcgtgcaaaaaaagattcaagtgataggcgtcacttttcaccagctcaaata agggaaatccctcagcgggcttcttctaatgaaccacatgcttttcttcaggttgatgct ctagggagggttccattctcatcaattcgcaggccacgtcctctactggaagttgatcca cctaactcctcacgtgctggtgatcctgagcaaaagatttcagaaaagccccttgaacag gagccaatgttggtatcaagggtcacaattgaggatggtctttgtgttcttctggatgta gatgatattgaccgtttcctacagtttaataagcagcttcaagatggtggagatcattta aaacgtaaaaggcagggtcttttggaaggtctttcagccacacttcagttagttgatcca cttggaagaaatggacatacagttgaacttgctgcaaaagatgattttgtttttctcagg atagtttctctacccaaaggtcgaaaactacttgctaggtaccttcaactactttttcca ggtggggatcttatgcgggtagtctgcatggccatttgtcgtcatttaagattcttattt ggcagtcttccctctgatccaactgcatcagaaactgtaattaaccttgctaaggtggtt tcaaattgcatctgtgagatggatcttgttgcacttagtgtttgccttgcttcagttgtt tgttcttctgagccaccgcctctgcgtccccttggaagcgctgctggagatgggacttcc cttattttagtatcagtgcttcagagggctactcaacttttaactgatcctcatgcggct agcaactataccattagaaatcgttctctttggcaagcttcatttgatgaattctttgct cttctcgccaagtattgtttcagtaaatatgatagcatcgtgcaagcattccttgctcaa ggggcatcaaatatggcggtcattgggcctgattttgctagagctattagcagtgagata ccagttgatctcttgcgtgcaagtctacctcacactgatgatcgccagaaaaaaatatta ctcgactttgctcagcgctctgtagttggatataatagtaattctggtggtaatggtcac caagtaaactcacagtccagtcagtga

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