Trifolium pratense (red clover): 123894176 Help Entry 123894176         CDS       T08949                                  Name (RefSeq) protein PAT1 homolog   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism tpra  Trifolium pratense (red clover) Pathway tpra03018   RNA degradation Brite KEGG Orthology (KO) [BR:tpra00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     123894176  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tpra03019]     123894176 Messenger RNA biogenesis [BR:tpra03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      123894176   mRNA degradation factors    5'-3' decay     Decapping complex      123894176 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  123894176 NCBI-ProteinID:  XP_045800049 LinkDB All DBs Position LG7:39921902..39930702 Genome browser AA seq 883 aa AA seqDB search MVDMDGFGGGGGGGDIGGGGPNTGDLRQLGHVPTGGAVFDASQYAFFGKDAVQEVELGGL EDDAHLPTFESNEEEFFFNREQDEDVRSLSDIDDLTTTFWKLNKVVSGPRNPGVIGERGS RENSTSDLAQRDDVHTWFDQNAYDSEGSIDGKRWSSQPQSSLAHLQNSKSLYRTSSYPEQ LRQDQNYHLQHCSSEPVHNWLDQHIYDIETAHDDKRWSSQPHNSIPHLHESTSLYRTSSY PDKQQELTRFSSEPILVQKSSFTSYPPPGGRSQQGSPSHSTGHLNIPYHTGTAAQMALSS QNRSHFSNSALQLSGLSLGSHFGGNTRQFPTASSPLSQRIQNQLVNQGGLYPGDRSNLLS NMLQQQLHLHSGSVSPHLMTQLQQQQHRVHHPVQQSAGYLSGFQSHLFNPHLSSSSSGSS KYDHRPKSTQKGKHSHRLSHQGSDASSQKSESSSLQFRSKYMTSDEIESILRMQLAVTHS NDPYIDDYYHQGRLAKKPSVVKLKHPFCPTQIKDLPSRTRSSNDPHAFLQVDSLGRVSFS SIRRPRPLLEVDPPISSVPGSSELKISEKPLEQEPTFAARVTIEDGLCLLLDVDDIDRFL QSNQPQDGGTQLRRRRQVLLEGLATSLKLVDPLGKNGHKVGLAAKDDIVFLRIVSVPKGR KLLAKYLQLLLPGSELMRIVCMTVLRHLRFLFGGLPSDPAAAVTTCRLAEVVCQCVRGMD LGALSACLAAVVCSAEHPPLRPVGSTAGDGASLILVSVLQRATELLTDPHAACNYKMGNR SFWQASFDEFFGLLTKYCMNKFQSIMQSLHIPNSPNVDDIGSDAAKAISTEMPVELLRAS LPHTDDRQRKLLLDFAQRSVPVVGFNSNSGGSGGLVNSETVLS NT seq 2652 nt NT seq  +upstreamnt  +downstreamnt atggtggatatggatggatttggtggaggtgggggtggtggtgatattggtggaggaggt cctaatactggagatcttaggcaattgggtcatgttcctacaggaggtgctgtttttgat gcatcacaatatgcattctttggtaaagatgctgttcaggaagttgagttgggagggtta gaagatgatgcccatttgccaacttttgagtctaatgaggaggaattcttttttaataga gaacaggacgaggatgtaagatctctttccgatattgatgatcttacaaccaccttttgg aagttgaacaaggttgtcagtggaccaagaaacccaggtgttattggtgaacgaggatca agagaaaactctacatctgatttggcacaaagagacgatgttcatacctggtttgatcag aatgcttatgatagtgaaggttcaattgatggaaaaagatggtcatcacagccccaatct tctcttgcccatttacaaaactcaaagtccttgtacagaacatcttcatatcctgagcag ctaaggcaggatcaaaactaccacctccaacattgctccagtgagccggttcacaactgg cttgatcagcatatttatgatattgaaacagctcatgatgacaaacgatggtcatctcag ccacataactccattccacacttacatgaatcaacatccttgtacagaacatcttcatat cccgacaaacaacaggagcttactcgtttttctagtgagccaatattggtacagaagtct tcgttcacttcttatcctccgccgggtggtcgatctcagcagggttctccaagtcatagt acaggccacttaaacattccttatcacactggaacagcagctcagatggcactatcatct caaaatcgttcacatttctccaattctgcactacagttgagtggattaagccttgggtca cattttggtggaaacacacgccaatttccaactgcttcctcccctcttagtcaacgaata cagaaccaactggtcaaccaaggagggttatatccaggagatcgttccaacctccttagt aatatgttgcagcaacagttacaccttcatagtggatcagtttctcctcacttgatgact caattgcaacagcaacagcatagagtccatcatcctgttcagcaatctgcaggctacttg tctggtttccagtcccatttatttaatccccacctttcctccagctcctctggcagtagc aagtatgatcacagaccgaaatcaactcaaaaaggtaaacatagtcatcgtttatcgcat caaggttctgatgccagtagccagaagagtgaaagcagttcattacagtttcggtccaag tatatgacgagtgatgaaattgagagtattcttagaatgcagcttgctgtcactcatagt aatgatccatacatagatgactattaccaccaaggtcgtcttgcgaaaaaaccttccgtg gttaagttaaaacatccgttctgcccaacccaaataaaggatcttccttcacgaacacgt tctagtaatgatccacatgcatttcttcaggttgattccctagggagggtttcattttcg tctattcgtcgacctcgccctcttcttgaggttgatcctccaatctcttctgttcctggt agctccgagctgaagatttcagagaagcctcttgaacaggagcctacatttgctgccaga gtcacaattgaggacggtctttgtcttcttcttgatgtagatgatattgatcgtttctta cagtctaatcagccacaagatggtggaacgcaattaagacgaagaaggcaggtcctgtta gaaggactagctacttcacttaaactggttgacccgctgggaaagaatgggcacaaggtt ggacttgcagctaaggatgacattgttttcttacggatagtatctgtccctaagggacgc aagctccttgcgaaatatcttcaattgcttcttcctggtagtgagctcatgcggatagtg tgcatgaccgtccttcggcatttaagattcttatttggtgggctcccctcagatccggca gctgcagtgactacatgcagacttgctgaggttgtttgccaatgtgtccgaggaatggat cttggtgctcttagtgcctgtcttgctgcagttgtttgttctgcagagcatcctcctcta cgccctgttggaagcactgctggagatggtgcttcccttattttggtatctgttcttcag agggctaccgagcttctaaccgatccacatgcagcctgcaactataagatgggtaatcgt tcgttttggcaggcctcatttgatgaattctttggccttcttactaagtattgcatgaat aaattccagagtatcatgcagtccctgcatataccaaattcaccaaatgtggatgacatt ggatcagatgctgctaaagctattagtacagaaatgcctgttgaactcttgcgtgcaagc ctccctcacactgatgaccgccaaaggaagttattactggactttgctcagcgatctgtt cccgtggttggatttaacagtaattctgggggaagcggaggtcttgtgaattcagagaca gtgctaagttga

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