Trifolium pratense (red clover): 123894297
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Entry
123894297 CDS
T08949
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123894297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123894297
03036 Chromosome and associated proteins [BR:
tpra03036
]
123894297
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123894297
Coactivators
SAGA/TFTC/STAGA complex
123894297
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
123894297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
123894297
NCBI-ProteinID:
XP_045800211
LinkDB
All DBs
Position
LG7:7660223..7671172
Genome browser
AA seq
916 aa
AA seq
DB search
MDPSIVKLLEDDEDETMHSGADVEAFQAALNRDIGGDASNSQLSDSDAGSNNSFSQSLST
WPTSSHDNQIDCQNQEPKIAQLQEQPSSEMVLKQEGPIVEQIRNVASQDASNLTLSHKKS
QDEFLQRQTVPVSHQHPQTNEVLKSEKDPIFNHEAIKTSNPNCESQYAKLQQMSNQQATV
NEQPSSQVNRSKQVPFGLLLPILIPQLAKDRAMQLQTLFNKLKRDEIPKDNFVRLMKGIV
GDQMLRIALTKVQQQTKANTGSSGQQHPVRMPSVTSSGTKFNDPHALAQLHQRSMSAAPD
HSHNTSSGIQVKSEPTYSTMDISAKKPQEHDVRVVQPTQLPSSSSNAVSQETERSSVHIQ
GLNKQQQQHIHFPSTYGSSGGNYIPFSGTTTGSSPSLRPQPHPHDSHMRQIPHQNIGLSH
LGVERQSSFNDPKRMPGGSVPTVVNNTSSQQNSNSWQPSAEQNPGLFTSMSYVKKEPNDL
SIDQQHRHHLSKLHGLPSVNSGQNEQGSGINQGPVKDEFSRGSVVSTSMPHTTSASLPPN
SAAPSASQLDPTVSLSSQIPASTSGINAKAPLKKTPLGQKKPLEALGSSPPPPSKKQKVS
GSSLEQSIEQLNDVAAVSGVDLREEEEQLFSGSKEDSRASEASRRVVQEEEESLILLKAP
LQRKLIEIMTEYGLKGMSNDVEKCLSLCVEERMRGVISNIIRMSKQRVDIEKTRHRTVVT
SDVRQQIMTMNRKAREEWEKKQAEADKLRKLNDVDGGSGVDGDKEKDDGRNKGTKVNKDV
DDKMRTNAANVAARAAVGGDDMLSKWQLMAEQAKQKREGGTDNASGSQPAKDVSRKSSPS
SGRNTRDNQERERKGPTSLGNSAAARKFGKNQSPGSQTRIARNISVKDVIAVLEREPQMS
KSSLLYRLHDRIHSDT
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggacccatctatagtgaagcttcttgaagatgatgaggacgaaactatgcattcaggg
gcagatgtggaagcgttccaagctgcattgaatagagacataggtggagatgcttctaat
tctcagctttctgattcagatgcaggaagcaataattcattcagtcaatcattatcaact
tggccaacttctagccatgacaaccagattgactgtcaaaatcaggagcctaaaattgca
cagctgcaagagcaaccttcctctgaaatggtgctgaagcaagaaggacctatcgtggaa
cagatacggaatgttgcctcacaggatgcaagtaatcttactttatcacacaaaaaatct
caagatgaatttctccaacgccagactgtaccagtttcccaccaacatcctcaaacaaat
gaagttctgaaatctgaaaaagatcctatcttcaaccatgaggcaatcaaaacaagtaat
cccaactgtgaatctcagtatgcaaagctacagcagatgagtaatcaacaggccacggtc
aatgaacaacctagtagccaagtcaatcgtagtaaacaggtaccgtttggcttgttgctc
cctattttgattccccaacttgccaaagacagagccatgcaacttcaaactttatttaac
aaattgaagagagatgaaatacctaaagataattttgtacggcttatgaaagggatcgtg
ggggatcagatgcttagaatagcattaacaaaagtgcaacaacagacaaaagccaacaca
ggttcttctggacagcagcaccctgtaaggatgccaagtgttacttccagtggaacaaag
tttaacgatccccatgcattagcacaactgcatcagagaagtatgagtgctgctccagac
cattctcataatacttcttcgggtatccaagtgaagagtgagcctacctattcgactatg
gacattagtgctaaaaaacctcaggaacacgatgttcgagtagtgcaaccaactcaatta
ccatcatccagttctaatgccgttagtcaagaaactgaaagatcctcagttcacatacaa
ggccttaataagcagcaacaacagcatatacatttcccatcgacatatggaagcagtggt
ggtaactatatccctttttctggaacaaccactggttcatcaccatctctcagaccacaa
cctcatcctcatgattcgcacatgaggcaaattccacatcagaacattggtctaagtcac
ttaggtgtagaacggcagagttctttcaatgatcctaagagaatgccaggtggatctgtg
ccgactgtggtaaacaatacatcatcacaacaaaattcaaattcttggcaaccatcagca
gaacaaaatccaggcttgtttacatctatgtcatatgtaaaaaaggaacctaatgatctt
tccattgatcagcaacacaggcatcatttgtcgaaattgcatgggttgccttctgttaat
tctggtcaaaatgaacagggtagcggtatcaatcaaggccctgtaaaggatgagttttca
agaggttctgtagtatcaactagcatgccgcatacaacatctgctagcttgccgccaaat
tctgctgccccttctgcatctcaactagatccaactgtctctttaagctctcagatccca
gctagcacttctggtattaatgcaaaggcacctctaaaaaaaactcctcttggccagaag
aaaccacttgaagcacttggttcttcacctccccctccaagtaagaaacaaaaggtgtct
ggctcatctctggaacaaagcattgaacagcttaatgatgttgctgctgttagtggtgtt
gatcttagggaagaggaagaacagttattttctgggtccaaggaggacagtcgagcttca
gaagcatctcgaagagttgtgcaagaagaggaggaaagtctgattttgctgaaagctcca
ttgcagagaaagttgattgagattatgaccgagtatggcttgaaaggcatgagtaatgat
gtagaaaaatgcttgtcactgtgtgtggaagagagaatgcgtggagtaataagtaacata
attagaatgtcaaaacagcgggttgatattgagaaaacaagacatcggactgttgtcacg
tcagatgttcgacagcaaatcatgacaatgaataggaaagcaagggaagagtgggagaaa
aaacaggctgaagcagacaagctccggaaactaaatgatgtagacggtggttccggagtt
gatggtgacaaggagaaggatgatggtcgcaataaaggaacaaaggtgaacaaggatgta
gatgacaagatgaggacaaatgctgcaaatgttgcagcccgagctgctgttggaggagat
gacatgctgtcaaagtggcaacttatggctgagcaagccaagcaaaaacgcgaagggggg
acggacaatgcatctggttctcagccagctaaagatgtcagtcgcaaatcttcaccatca
tctggaaggaacacaagagataatcaagaaagggagagaaaaggtccaacttctcttggg
aattcagcggctgctaggaaatttgggaaaaatcaatcccctggatctcaaactcggata
gctcgtaacatctctgtgaaggatgtgattgcagtcttagagagggaacctcagatgtcc
aaatcatcactcttatatcgattgcatgataggattcattctgatacttga
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