Trifolium pratense (red clover): 123894496
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Entry
123894496 CDS
T08949
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123894496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123894496
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123894496
Membrane trafficking [BR:
tpra04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
123894496
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123894496
Exosomal proteins of colorectal cancer cells
123894496
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MKT1_C
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
123894496
NCBI-ProteinID:
XP_045800465
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All DBs
Position
LG7:complement(16849102..16857747)
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AA seq
447 aa
AA seq
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MTGNSLPPVKLTDSGRPVLLPNEIECFFLSGVDLLCEDEPNTWFPHLKSGLLILTTHRLL
WIPDAAVDASTSASSVPLASISHIFPHKKSLKSVFASPRVRFQVSPSPERGVATAGSRSV
VVTVVVRGKGDCDAFVAKFWENWRARAWEESEKAMSSSSNVAAVAGSSSSGIYSSDGTVR
MVGVSGILRKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRQKLLSGSNSQTNT
TNDEEMGSKEEMQELLLSVGIISPVTKESAGALYHQQLSRQLADFVKVPLDRAGGIINLI
DIYCLFNRARGTELISPDDLLQACSLWEKFDVPIVLRKFDSGVMVIQNKSHSDEEVFTKI
KVLVMKPDALRSGISPSDAAMTLGVAPAMAKEHLLSAESKGILCRDVSPDGFRFYINLFS
EIDRDDMHLVKDHGIYASWIRATPAHG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaccggaaactctttaccgccggtgaagctcaccgacagtggccgaccagttctgtta
ccgaacgagatcgagtgcttcttcctctccggcgtagaccttctctgcgaagatgaaccc
aacacatggttccctcacctaaaatccggcctcctcatcctcacaacgcaccgtctcctt
tggattccagacgccgccgttgatgcctctacctccgcctcttccgtcccccttgcttcg
atctcccacattttcccccacaagaagtccctaaaatcggtattcgcctctccaagggtt
cgtttccaggtatcgccatcgccggagcgtggagttgctacggcgggatcgagatcggta
gttgtgaccgttgtggtaaggggaaaaggggattgtgatgcttttgtggcgaagttttgg
gagaattggagagccagagcgtgggaggagtcagagaaggctatgagttcgagctcgaat
gtggcggctgtggcaggttcttcgtcgagtgggatttattcgagtgatgggacggtgcgg
atggtgggagtttcggggatattgaggaaagaacaggaaatgtgggagagtactgataag
agtttgcaagatgcttttcaggatttgaatgctcttatgagcaaggctaaagagatggtg
atgctagcggaaaaaatgaggcaaaaacttttgtcaggctcaaattctcaaacaaataca
actaatgatgaggagatgggttcaaaggaagagatgcaagaattgttattgagtgttggt
ataatatcccccgttacaaaagagtctgcgggtgctttgtatcatcaacagttatctcgc
cagttggcagattttgttaaagttccactagatagagctggaggaattatcaatttaatt
gacatttattgtctcttcaatcgtgctcgtgggacagagttgatctcacccgatgatttg
ttgcaagcatgctctctgtgggaaaagtttgatgtcccaattgttctgcggaagtttgat
agtggtgtcatggtaatacaaaataagtcccacagtgatgaggaggttttcactaaaatt
aaggtgcttgttatgaagcctgatgctcttcgatctgggataagtcctagtgatgctgca
atgacactaggagttgccccagcaatggcgaaggaacatctcttgtctgctgagagcaag
ggtatactttgcagagatgtaagccctgatggatttcgattttatattaacttgttctca
gaaattgatcgagatgatatgcatttagtgaaagatcatgggatttatgcctcatggata
agagcaacccctgcccatggttag
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